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聚焦后基因组时代的比较猿类群体遗传学。

Focusing on comparative ape population genetics in the post-genomic age.

作者信息

Stone Anne C, Verrelli Brian C

机构信息

School of Human Evolution and Social Change, Arizona State University, Tempe, AZ 85287-2402, USA.

出版信息

Curr Opin Genet Dev. 2006 Dec;16(6):586-91. doi: 10.1016/j.gde.2006.09.003. Epub 2006 Sep 28.

DOI:10.1016/j.gde.2006.09.003
PMID:17010600
Abstract

The initial human and chimpanzee genome sequences have been published, and additional primate genomes, including those of gorilla and orang-utan, are in progress. With these new resources, we can now address what makes our species unique, by focusing on the underlying genetic differences associated with phenotypes. Comparative primate population genomics, including studies of structural changes, mobile elements, gene expression and functional analyses, will shed light on how natural selection and population demography are involved in the processes that lead to differences among great apes. Historically, this research has focused on the human perspective; however, we will learn much about ourselves with a focus on genomic diversity in hominoids as a group.

摘要

人类和黑猩猩的初始基因组序列已经公布,包括大猩猩和猩猩在内的其他灵长类动物基因组测序工作也在进行中。有了这些新资源,我们现在可以通过关注与表型相关的潜在基因差异,来探究是什么让我们的物种独一无二。比较灵长类动物群体基因组学,包括对结构变化、移动元件、基因表达和功能分析的研究,将阐明自然选择和群体人口统计学如何参与导致大猩猩之间差异的过程。从历史上看,这项研究一直侧重于人类视角;然而,通过关注作为一个群体的类人猿的基因组多样性,我们将更多地了解我们自己。

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Genes (Basel). 2022 Jan 21;13(2):183. doi: 10.3390/genes13020183.
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More reliable estimates of divergence times in Pan using complete mtDNA sequences and accounting for population structure.使用完整的 mtDNA 序列并考虑群体结构,对 Pan 中的分歧时间进行更可靠的估计。
Philos Trans R Soc Lond B Biol Sci. 2010 Oct 27;365(1556):3277-88. doi: 10.1098/rstb.2010.0096.
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Haplotype structure and divergence at human and chimpanzee serotonin transporter and receptor genes: implications for behavioral disorder association analyses.
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Mol Biol Evol. 2010 Jul;27(7):1518-29. doi: 10.1093/molbev/msq030. Epub 2010 Jan 29.
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Different selective pressures shape the molecular evolution of color vision in chimpanzee and human populations.不同的选择压力塑造了黑猩猩和人类群体中色觉的分子进化。
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No effect of recombination on the efficacy of natural selection in primates.重组对灵长类动物自然选择效力无影响。
Genome Res. 2008 Apr;18(4):544-54. doi: 10.1101/gr.071548.107. Epub 2008 Jan 16.
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A new approach to estimate parameters of speciation models with application to apes.一种估计物种形成模型参数的新方法及其在猿类中的应用。
Genome Res. 2007 Oct;17(10):1505-19. doi: 10.1101/gr.6409707. Epub 2007 Aug 21.