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SIR2修饰组蛋白H4-K16的乙酰化,并影响酿酒酵母质粒染色质ARS区域的超螺旋状态。

SIR2 modifies histone H4-K16 acetylation and affects superhelicity in the ARS region of plasmid chromatin in Saccharomyces cerevisiae.

作者信息

Chiani Francesco, Di Felice Francesca, Camilloni Giorgio

机构信息

Dipartimento di Genetica e Biologia Molecolare, Università di Roma La Sapienza, Rome, Italy.

出版信息

Nucleic Acids Res. 2006;34(19):5426-37. doi: 10.1093/nar/gkl678. Epub 2006 Sep 29.

DOI:10.1093/nar/gkl678
PMID:17012273
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1636471/
Abstract

The null mutation of the SIR2 gene in Saccharomyces cerevisiae has been associated with a series of different phenotypes including loss of transcriptional silencing, genome instability and replicative aging. Thus, the SIR2 gene product is an important constituent of the yeast cell. SIR2 orthologues and paralogues have been discovered in organisms ranging from bacteria to man, underscoring the pivotal role of this protein. Here we report that a plasmid introduced into sir2Delta cells accumulates more negative supercoils compared to the same plasmid introduced into wild-type (WT) cells. This effect appears to be directly related to SIR2 expression as shown by the reduction of negative supercoiling when SIR2 is overexpressed, and does not depend on the number or positioning of nucleosomes on plasmids. Our results indicate that this new phenotype is due to the lack of Sir2p histone deacetylase activity in the sir2Delta strain, because only the H4-K16 residue of the histone octamer undergoes an alteration of its acetylation state. A model proposing interference with the replication machinery is discussed.

摘要

酿酒酵母中SIR2基因的无效突变与一系列不同表型相关,包括转录沉默丧失、基因组不稳定和复制性衰老。因此,SIR2基因产物是酵母细胞的重要组成部分。在从细菌到人类的各种生物体中都发现了SIR2直系同源物和旁系同源物,这突出了该蛋白质的关键作用。在此我们报告,与导入野生型(WT)细胞的相同质粒相比,导入sir2Δ细胞的质粒积累了更多的负超螺旋。如过表达SIR2时负超螺旋减少所示,这种效应似乎与SIR2表达直接相关,并且不依赖于质粒上核小体的数量或定位。我们的结果表明,这种新表型是由于sir2Δ菌株中缺乏Sir2p组蛋白脱乙酰酶活性,因为只有组蛋白八聚体的H4-K16残基的乙酰化状态发生了改变。文中讨论了一个提出干扰复制机制的模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/30a56c5256ef/gkl678f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/c63dc1047951/gkl678f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/269b370e3872/gkl678f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/a8ddb5f59951/gkl678f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/998d1ffc5280/gkl678f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/30a56c5256ef/gkl678f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/c63dc1047951/gkl678f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/269b370e3872/gkl678f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/a8ddb5f59951/gkl678f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/998d1ffc5280/gkl678f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df66/1636471/30a56c5256ef/gkl678f6.jpg

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本文引用的文献

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Budding yeast silencing complexes and regulation of Sir2 activity by protein-protein interactions.出芽酵母沉默复合物及蛋白质-蛋白质相互作用对Sir2活性的调控
Mol Cell Biol. 2004 Aug;24(16):6931-46. doi: 10.1128/MCB.24.16.6931-6946.2004.
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The Sir2 family of protein deacetylases.蛋白质去乙酰化酶的Sir2家族。
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The NAD(+)-dependent Sir2p histone deacetylase is a negative regulator of chromosomal DNA replication.依赖烟酰胺腺嘌呤二核苷酸(NAD⁺)的Sir2p组蛋白去乙酰化酶是染色体DNA复制的负调控因子。
干扰糖酵解会导致酿酒酵母质粒的Sir2依赖性超重组。
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Corepressive action of CBP on androgen receptor transactivation in pericentric heterochromatin in a Drosophila experimental model system.在果蝇实验模型系统中,CBP对雄激素受体在着丝粒周围异染色质中的反式激活的共抑制作用。
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Cryo-electron microscopy reveals a novel DNA-binding site on the MCM helicase.冷冻电子显微镜揭示了MCM解旋酶上一个新的DNA结合位点。
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Association of the RENT complex with nontranscribed and coding regions of rDNA and a regional requirement for the replication fork block protein Fob1 in rDNA silencing.RENT复合物与核糖体DNA的非转录区和编码区的关联以及核糖体DNA沉默中复制叉阻断蛋白Fob1的区域需求。
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Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus.单分子分析揭示了酵母核糖体DNA位点复制起点的聚集和表观遗传调控。
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