Morikubo Noriko, Fukuda Yoriyuki, Ohtake Kazumasa, Shinya Naoko, Kiga Daisuke, Sakamoto Kensaku, Asanuma Miwako, Hirota Hiroshi, Yokoyama Shigeyuki, Hoshino Tsutomu
Department of Applied Biological Chemistry, Faculty of Agriculture, and Graduate School of Science and Technology, Niigata University, 8050, Niigata, Niigata 950-2181, Japan.
J Am Chem Soc. 2006 Oct 11;128(40):13184-94. doi: 10.1021/ja063358p.
It has been assumed that the pi-electrons of aromatic residues in the catalytic sites of triterpene cyclases stabilize the cationic intermediates formed during the polycyclization cascade of squalene or oxidosqualene, but no definitive experimental evidence has been given. To validate this cation-pi interaction, natural and unnatural aromatic amino acids were site-specifically incorporated into squalene-hopene cyclase (SHC) from Alicyclobacillus acidocaldarius and the kinetic data of the mutants were compared with that of the wild-type SHC. The catalytic sites of Phe365 and Phe605 were substituted with O-methyltyrosine, tyrosine, and tryptophan, which have higher cation-pi binding energies than phenylalanine. These replacements actually increased the SHC activity at low temperature, but decreased the activity at high temperature, as compared with the wild-type SHC. This decreased activity is due to the disorganization of the protein architecture caused by the introduction of the amino acids more bulky than phenylalanine. Then, mono-, di-, and trifluorophenylalanines were incorporated at positions 365 and 605; these amino acids reduce cation-pi binding energies but have van der Waals radii similar to that of phenylalanine. The activities of the SHC variants with fluorophenylalanines were found to be inversely proportional to the number of the fluorine atoms on the aromatic ring and clearly correlated with the cation-pi binding energies of the ring moiety. No serious structural alteration was observed for these variants even at high temperature. These results unambiguously show that the pi-electron density of residues 365 and 605 has a crucial role for the efficient polycyclization reaction by SHC. This is the first report to demonstrate experimentally the involvement of cation-pi interaction in triterpene biosynthesis.
人们一直认为,三萜环化酶催化位点中芳香族残基的π电子可稳定在角鲨烯或氧化角鲨烯多环化级联反应过程中形成的阳离子中间体,但尚未给出确切的实验证据。为验证这种阳离子-π相互作用,将天然和非天然芳香族氨基酸位点特异性地引入嗜酸 Alicyclobacillus acidocaldarius 的角鲨烯-藿烯环化酶(SHC)中,并将突变体的动力学数据与野生型 SHC 的进行比较。用 O-甲基酪氨酸、酪氨酸和色氨酸取代苯丙氨酸 365 和苯丙氨酸 605 的催化位点,这些氨基酸比苯丙氨酸具有更高的阳离子-π结合能。与野生型 SHC 相比,这些取代实际上提高了 SHC 在低温下的活性,但降低了高温下的活性。活性降低是由于引入了比苯丙氨酸体积更大的氨基酸导致蛋白质结构紊乱。然后,在 365 和 605 位引入单氟、二氟和三氟苯丙氨酸;这些氨基酸降低了阳离子-π结合能,但具有与苯丙氨酸相似的范德华半径。发现含氟苯丙氨酸的 SHC 变体的活性与芳香环上氟原子的数量成反比,并且与环部分的阳离子-π结合能明显相关。即使在高温下,这些变体也未观察到严重的结构改变。这些结果明确表明,365 和 605 位残基的π电子密度对 SHC 高效的多环化反应起着关键作用。这是第一份通过实验证明阳离子-π相互作用参与三萜生物合成的报告。