Onsum Matthew David, Wong Kit, Herzmark Paul, Bourne Henry R, Arkin Adam Paul
Department of Mechanical Engineering, University of California, Berkeley, CA 94720, USA.
Phys Biol. 2006 Sep 25;3(3):190-9. doi: 10.1088/1478-3975/3/3/004.
A key mediator of eukaryotic chemotaxis is the asymmetric accumulation of phosphatidylinositol-3,4,5-triphosphate (PIP3) on the cell membrane. Recent work has focused on understanding how a shallow external gradient of chemoattractant leads to an amplified internal gradient of PIP3. In this paper we dissect what fraction of this amplification is derived biochemically by the signal transduction network and how much arises entirely from the effects of cell morphology. Here we identify and formalize the role of morphology in signal detection and demonstrate its effects through simulation and experiments. Our key result is that an asymmetric distribution of membrane accounts for approximately one-half of the measured amplification from ligand concentration to PIP3 production. We also show that the underlying biochemical network behaves as a linear amplifier in the micropipette assay.
真核生物趋化性的一个关键介质是细胞膜上磷脂酰肌醇-3,4,5-三磷酸(PIP3)的不对称积累。最近的研究工作集中在理解趋化因子的浅层外部梯度如何导致PIP3的内部梯度放大。在本文中,我们剖析了这种放大的哪一部分是由信号转导网络通过生化方式产生的,以及有多少完全是由细胞形态的影响导致的。在这里,我们确定并形式化了形态在信号检测中的作用,并通过模拟和实验证明了其效果。我们的关键结果是,膜的不对称分布约占从配体浓度到PIP3产生的测量放大倍数的一半。我们还表明,在微量移液器试验中,潜在的生化网络表现为线性放大器。