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古尔巴根链霉菌新种,从印度卡纳塔克邦的土壤中分离得到。

Streptomyces gulbargensis sp. nov., isolated from soil in Karnataka, India.

作者信息

Dastager Syed G, Li Wen-Jun, Agasar Dayanand, Sulochana Mudgulkar B, Tang Shu-Kun, Tian Xin-Peng, Zhi Xiao-Yang

机构信息

Key Laboratory for Microbial Resources of Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, Yunnan 650 091, P.R. China.

出版信息

Antonie Van Leeuwenhoek. 2007 Feb;91(2):99-104. doi: 10.1007/s10482-006-9099-1.

Abstract

During the course of screening for industrially important microorganisms, an alkali-tolerant and thermotolerant actinomycete, strain DAS 131T, was isolated from a soil sample collected from the Gulbarga region, Karnataka province, India. The strain was characterized by a polyphasic approach that showed that it belonged to the genus Streptomyces. Growth was observed over a wide pH range (pH 6-12) and at 45 degrees C. The 16S rRNA gene sequence of strain DAS 131T was deposited in the GenBank database under the accession number DQ317411. 16S rRNA gene sequence analysis revealed that strain DAS 131T was most closely related to Streptomyces venezuelae ISP 5230T (AY999739) with a sequence similarity of 99.5% (8 nucleotide differences out of 1,477). Despite this very high sequence similarity, strain DAS 131T was phenetically distinct from S. venezuelae. The DNA relatedness between these strains was 54%, indicating that strain DAS 131T is a distinct genomic species. On the basis of phenetic and genetic analyses, strain DAS 131T is classified as a new species in the genus Streptomyces, for which we propose the name Streptomyces gulbargensis sp. nov.

摘要

在筛选具有工业重要性的微生物过程中,从印度卡纳塔克邦古尔伯加地区采集的土壤样本中分离出一株耐碱耐热放线菌,菌株DAS 131T。采用多相分类法对该菌株进行表征,结果表明它属于链霉菌属。在较宽的pH范围(pH 6 - 12)和45℃条件下均能观察到其生长。菌株DAS 131T的16S rRNA基因序列已保存在GenBank数据库中,登录号为DQ317411。16S rRNA基因序列分析表明,菌株DAS 131T与委内瑞拉链霉菌ISP 5230T(AY999739)关系最为密切,序列相似性为99.5%(1477个核苷酸中有8个差异)。尽管序列相似性非常高,但菌株DAS 131T在表型上与委内瑞拉链霉菌不同。这些菌株之间的DNA相关性为54%,表明菌株DAS 131T是一个独特的基因组物种。基于表型和遗传分析,菌株DAS 131T被归类为链霉菌属中的一个新物种,我们为此提议将其命名为古尔伯加链霉菌新种(Streptomyces gulbargensis sp. nov.)。

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