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拜氏不动杆菌转化能力降低的快速进化

Rapid evolution of diminished transformability in Acinetobacter baylyi.

作者信息

Bacher Jamie M, Metzgar David, de Crécy-Lagard Valérie

机构信息

Skaggs Institute for Chemical Biology and Department of Molecular Biology, The Scripps Research Institute, 10550 N. Torrey Pines Rd., BCC-379, La Jolla, CA 92037, USA.

出版信息

J Bacteriol. 2006 Dec;188(24):8534-42. doi: 10.1128/JB.00846-06. Epub 2006 Oct 6.

DOI:10.1128/JB.00846-06
PMID:17028281
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1698229/
Abstract

The reason for genetic exchange remains a crucial question in evolutionary biology. Acinetobacter baylyi strain ADP1 is a highly competent and recombinogenic bacterium. We compared the parallel evolution of wild-type and engineered noncompetent lineages of A. baylyi in the laboratory. If transformability were to result in an evolutionary benefit, it was expected that competent lineages would adapt more rapidly than noncompetent lineages. Instead, regardless of competency, lineages adapted to the same extent under several laboratory conditions. Furthermore, competent lineages repeatedly evolved a much lower level of transformability. The loss of competency may be due to a selective advantage or the irreversible transfer of loss-of-function alleles of genes required for transformation within the competent population.

摘要

基因交换的原因仍是进化生物学中的一个关键问题。拜氏不动杆菌ADP1菌株是一种高度感受态且具有重组能力的细菌。我们在实验室中比较了拜氏不动杆菌野生型和工程改造的非感受态谱系的平行进化。如果可转化性能带来进化优势,那么预期感受态谱系会比非感受态谱系更快适应。然而,无论是否具有感受态,在几种实验室条件下谱系的适应程度相同。此外,感受态谱系反复进化出低得多的可转化性水平。感受态的丧失可能是由于选择优势或功能丧失等位基因在感受态群体中不可逆的转移,这些等位基因是转化所需基因的。

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本文引用的文献

1
A constitutively expressed, truncated umuDC operon regulates the recA-dependent DNA damage induction of a gene in Acinetobacter baylyi strain ADP1.一个组成型表达的截短型umuDC操纵子调控拜氏不动杆菌ADP1菌株中一个基因的recA依赖性DNA损伤诱导。
Appl Environ Microbiol. 2006 Jun;72(6):4036-43. doi: 10.1128/AEM.02774-05.
2
Naturally transformable Acinetobacter sp. strain ADP1 belongs to the newly described species Acinetobacter baylyi.天然可转化的不动杆菌属菌株ADP1属于新描述的物种拜氏不动杆菌。
Appl Environ Microbiol. 2006 Jan;72(1):932-6. doi: 10.1128/AEM.72.1.932-936.2006.
3
Opportunities for genetic investigation afforded by Acinetobacter baylyi, a nutritionally versatile bacterial species that is highly competent for natural transformation.拜氏不动杆菌提供了基因研究的机会,它是一种营养需求多样的细菌,具有很高的自然转化能力。
Annu Rev Microbiol. 2005;59:519-51. doi: 10.1146/annurev.micro.59.051905.105823.
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Mechanisms of, and barriers to, horizontal gene transfer between bacteria.细菌间水平基因转移的机制及障碍
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Sex increases the efficacy of natural selection in experimental yeast populations.性别增加了实验酵母群体中自然选择的效力。
Nature. 2005 Mar 31;434(7033):636-40. doi: 10.1038/nature03405.
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Inhibited cell growth and protein functional changes from an editing-defective tRNA synthetase.编辑缺陷型氨酰-tRNA合成酶导致的细胞生长抑制和蛋白质功能变化。
Proc Natl Acad Sci U S A. 2005 Feb 1;102(5):1697-701. doi: 10.1073/pnas.0409064102. Epub 2005 Jan 12.
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Acinetobacter sp. ADP1: an ideal model organism for genetic analysis and genome engineering.不动杆菌属ADP1菌株:用于遗传分析和基因组工程的理想模式生物。
Nucleic Acids Res. 2004 Oct 28;32(19):5780-90. doi: 10.1093/nar/gkh881. Print 2004.
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Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium.不动杆菌ADP1的基因组序列揭示的独特特征,ADP1是一种具有多种功能且天然具备转化能力的细菌。
Nucleic Acids Res. 2004 Oct 28;32(19):5766-79. doi: 10.1093/nar/gkh910. Print 2004.
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The growth advantage in stationary-phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment.rpoS突变赋予的稳定期表型生长优势取决于pH值和营养环境。
J Bacteriol. 2003 Dec;185(24):7044-52. doi: 10.1128/JB.185.24.7044-7052.2003.
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Parallel changes in gene expression after 20,000 generations of evolution in Escherichiacoli.大肠杆菌经过20000代进化后基因表达的平行变化。
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