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利用ERIC-PCR进行DNA指纹图谱分析以比较从阿根廷圣路易斯不同来源分离出的李斯特菌菌株。

DNA fingerprinting by ERIC-PCR for comparing Listeria spp. strains isolated from different sources in San Luis, Argentina.

作者信息

Laciar A, Vaca L, Lopresti R, Vega A, Mattana C, de Centorbi O N P

机构信息

Area Microbiología, Facultad de Química, Bioquímica y Farmacia, Universidad Nacional de San Luis, Chacabuco y Pedernera, 5700 San Luis, Argentina.

出版信息

Rev Argent Microbiol. 2006 Apr-Jun;38(2):55-60.

Abstract

In this study, a total of 24 Listeria spp. strains were analyzed. Twenty-two isolates were obtained in San Luis (Argentina) from human, animal, and food samples. Two types of strains, Listeria monocytogenes CLIP 22762 and Listeria innocua CLIP 74915, were included as reference strains. All isolates were biochemically identified and characterized by serotyping, phage typing, and amplification of the flaA gene by polymerase chain reaction (PCR). Repetitive intergenic consensus (ERIC) sequence-based PCR was used to generate DNA fingerprints. On the basis of ERIC-PCR fingerprints, Listeria spp. strains were divided into three major clusters matching origin of isolation. ERIC-PCR fingerprints of human and animal isolates were different from those of food isolates. In addition, groups I and II included ten L. monocytogenes strains, and only one Listeria seeligeri strain. Group III included nine L. innocua strains and four L. monocytogenes strains. Computer evaluation of ERIC-PCR fingerprints allowed discrimination between the tested serotypes 1/2b, 4b, 6a, and 6b within each major cluster. The index of discrimination calculated was 0.94. This study suggests that the ERIC-PCR technique provides an alternative method for the identification of Listeria species and the discrimination of strains within one species.

摘要

在本研究中,共分析了24株李斯特菌属菌株。其中22株分离株是从阿根廷圣路易斯的人类、动物和食品样本中获得的。两种菌株,即产单核细胞李斯特菌CLIP 22762和无害李斯特菌CLIP 74915,被用作参考菌株。所有分离株均通过生化鉴定,并进行血清分型、噬菌体分型以及通过聚合酶链反应(PCR)扩增flaA基因进行特征分析。基于重复基因间共有序列(ERIC)的PCR用于生成DNA指纹图谱。根据ERIC-PCR指纹图谱,李斯特菌属菌株被分为与分离来源相匹配的三个主要簇。人类和动物分离株的ERIC-PCR指纹图谱与食品分离株的不同。此外,I组和II组包括10株产单核细胞李斯特菌菌株,仅有1株斯氏李斯特菌菌株。III组包括9株无害李斯特菌菌株和4株产单核细胞李斯特菌菌株。对ERIC-PCR指纹图谱进行计算机评估能够区分每个主要簇内检测的血清型1/2b、4b、6a和6b。计算得出的鉴别指数为0.94。本研究表明,ERIC-PCR技术为李斯特菌属的鉴定以及一个物种内菌株的区分提供了一种替代方法。

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