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Tsix介导的Xist启动子CTCF侧翼区域的表观遗传开关决定了Xist转录程序。

Tsix-mediated epigenetic switch of a CTCF-flanked region of the Xist promoter determines the Xist transcription program.

作者信息

Navarro Pablo, Page Damian R, Avner Philip, Rougeulle Claire

机构信息

Unité de Génétique Moléculaire Murine, Institut Pasteur 75724, Paris Cedex 15, France.

出版信息

Genes Dev. 2006 Oct 15;20(20):2787-92. doi: 10.1101/gad.389006.

DOI:10.1101/gad.389006
PMID:17043308
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1619945/
Abstract

Initiation of X inactivation depends on the coordinated expression of the sense/antisense pair Xist/Tsix. We show here that a precisely defined Xist promoter region flanked by CTCF is maintained by Tsix in a heterochromatic-like state in undifferentiated embryonic stem (ES) cells and shifts to a pseudoeuchromatic structure upon Tsix truncation. We further demonstrate that the epigenetic state of the Xist 5' region prior to differentiation predicts the efficiency of transcriptional machinery recruitment to the Xist promoter during differentiation. Our results provide mechanistic insights into the Tsix-mediated epigenetic regulation of Xist resulting in Xist promoter activation and initiation of X inactivation in differentiating ES cells.

摘要

X染色体失活的起始依赖于Xist/Tsix正义/反义基因对的协同表达。我们在此表明,由CTCF侧翼包围的一个精确定义的Xist启动子区域,在未分化的胚胎干细胞中由Tsix维持在类似异染色质的状态,并在Tsix截短后转变为假常染色质结构。我们进一步证明,分化前Xist 5'区域的表观遗传状态可预测分化过程中转录机制募集到Xist启动子的效率。我们的结果为Tsix介导的Xist表观遗传调控提供了机制性见解,该调控导致分化中的胚胎干细胞中Xist启动子激活和X染色体失活的起始。

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Tsix-mediated epigenetic switch of a CTCF-flanked region of the Xist promoter determines the Xist transcription program.Tsix介导的Xist启动子CTCF侧翼区域的表观遗传开关决定了Xist转录程序。
Genes Dev. 2006 Oct 15;20(20):2787-92. doi: 10.1101/gad.389006.
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本文引用的文献

1
Nuclear mRNA degradation pathway(s) are implicated in Xist regulation and X chromosome inactivation.核mRNA降解途径与Xist调控及X染色体失活有关。
PLoS Genet. 2006 Jun;2(6):e94. doi: 10.1371/journal.pgen.0020094. Epub 2006 Jun 16.
2
An essential role for the DXPas34 tandem repeat and Tsix transcription in the counting process of X chromosome inactivation.DXPas34串联重复序列和Tsix转录在X染色体失活计数过程中的重要作用。
Proc Natl Acad Sci U S A. 2006 May 9;103(19):7390-5. doi: 10.1073/pnas.0602381103. Epub 2006 Apr 28.
3
A bivalent chromatin structure marks key developmental genes in embryonic stem cells.二价染色质结构标记胚胎干细胞中的关键发育基因。
Cell. 2006 Apr 21;125(2):315-26. doi: 10.1016/j.cell.2006.02.041.
4
A transient heterochromatic state in Xist preempts X inactivation choice without RNA stabilization.Xist中的一种短暂异染色质状态在没有RNA稳定的情况下预先决定X染色体失活的选择。
Mol Cell. 2006 Mar 3;21(5):617-28. doi: 10.1016/j.molcel.2006.01.028.
5
Antisense transcription and heterochromatin at the DM1 CTG repeats are constrained by CTCF.DM1 CTG重复序列处的反义转录和异染色质受到CTCF的限制。
Mol Cell. 2005 Nov 11;20(3):483-9. doi: 10.1016/j.molcel.2005.09.002.
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Delving into the diversity of facultative heterochromatin: the epigenetics of the inactive X chromosome.深入探究兼性异染色质的多样性:失活X染色体的表观遗传学
Curr Opin Genet Dev. 2005 Oct;15(5):482-9. doi: 10.1016/j.gde.2005.08.009.
7
Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin.组蛋白H3赖氨酸9甲基化和HP1γ与哺乳动物染色质的转录延伸相关。
Mol Cell. 2005 Aug 5;19(3):381-91. doi: 10.1016/j.molcel.2005.06.011.
8
The dynamics of chromatin remodeling at promoters.启动子处染色质重塑的动力学
Mol Cell. 2005 Jul 22;19(2):147-57. doi: 10.1016/j.molcel.2005.06.023.
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RNA meets chromatin.RNA与染色质相遇。
Genes Dev. 2005 Jul 15;19(14):1635-55. doi: 10.1101/gad.1324305.
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Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells.全染色体范围和启动子特异性分析确定了正常和转化的人类细胞中DNA甲基化差异位点。
Nat Genet. 2005 Aug;37(8):853-62. doi: 10.1038/ng1598. Epub 2005 Jul 10.