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协调不对称表达:调控背后的机制

Orchestrating Asymmetric Expression: Mechanisms behind Regulation.

作者信息

Luchsinger-Morcelle Samuel Jesus, Gribnau Joost, Mira-Bontenbal Hegias

机构信息

Department of Developmental Biology, Erasmus MC, University Medical Center, 3015 GD Rotterdam, The Netherlands.

出版信息

Epigenomes. 2024 Feb 1;8(1):6. doi: 10.3390/epigenomes8010006.

DOI:10.3390/epigenomes8010006
PMID:38390897
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10885031/
Abstract

Compensation for the gene dosage disequilibrium between sex chromosomes in mammals is achieved in female cells by repressing one of its X chromosomes through a process called X chromosome inactivation (XCI), exemplifying the control of gene expression by epigenetic mechanisms. A critical player in this mechanism is , a long, non-coding RNA upregulated from a single X chromosome during early embryonic development in female cells. Over the past few decades, many factors involved at different levels in the regulation of have been discovered. In this review, we hierarchically describe and analyze the different layers of regulation operating concurrently and intricately interacting with each other to achieve asymmetric and monoallelic upregulation of in murine female cells. We categorize these into five different classes: DNA elements, transcription factors, other regulatory proteins, long non-coding RNAs, and the chromatin and topological landscape surrounding .

摘要

在哺乳动物中,雌性细胞通过一种称为X染色体失活(XCI)的过程抑制其中一条X染色体,从而实现性染色体之间基因剂量不平衡的补偿,这是表观遗传机制对基因表达进行调控的一个例证。该机制中的一个关键参与者是 ,它是一种长链非编码RNA,在雌性细胞早期胚胎发育过程中从单条X染色体上调表达。在过去几十年里,已经发现了许多在不同水平参与 调控的因素。在这篇综述中,我们分层描述和分析了 调控的不同层面,它们同时运作并相互复杂地相互作用,以在小鼠雌性细胞中实现 的不对称和单等位基因上调。我们将这些分为五个不同类别:DNA元件、转录因子、其他调节蛋白、长链非编码RNA以及 周围的染色质和拓扑结构。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/6c74411729a4/epigenomes-08-00006-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/48bd0817fcbc/epigenomes-08-00006-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/1fca33615424/epigenomes-08-00006-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/6c74411729a4/epigenomes-08-00006-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/48bd0817fcbc/epigenomes-08-00006-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/1fca33615424/epigenomes-08-00006-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/079b/10885031/6c74411729a4/epigenomes-08-00006-g003.jpg

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引用本文的文献

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本文引用的文献

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Nat Cell Biol. 2023 Nov;25(11):1704-1715. doi: 10.1038/s41556-023-01266-x. Epub 2023 Nov 6.
3
Modeling X-chromosome inactivation and reactivation during human development.
在人类发育过程中对 X 染色体失活和重新激活进行建模。
Curr Opin Genet Dev. 2023 Oct;82:102096. doi: 10.1016/j.gde.2023.102096. Epub 2023 Aug 17.
4
Lppnx lncRNA: The new kid on the block or an old friend in X-inactivation choice?Lppnx长链非编码RNA:是新出现的事物还是X染色体失活选择中的老朋友?
Proc Natl Acad Sci U S A. 2023 Feb 14;120(7):e2218989120. doi: 10.1073/pnas.2218989120. Epub 2023 Feb 7.
5
Reply to Galupa et al: Discussing the role of Lppnx in the complexity of the X controlling element, Xce.对加卢帕等人的回复:探讨Lppnx在X染色体控制元件Xce的复杂性中的作用。
Proc Natl Acad Sci U S A. 2023 Feb 14;120(7):e2219685120. doi: 10.1073/pnas.2219685120. Epub 2023 Feb 7.
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