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Mechanism of bleomycin suicide: a Car-Parrinello molecular dynamics investigation.

作者信息

Karawajczyk Anna, Gossens Christian, Roethlisberger Ursula, Buda Francesco

机构信息

Gorlaeus Laboratories, Leiden Institute of Chemistry, P.O. Box 9502, 2300 RA Leiden, The Netherlands.

出版信息

J Phys Chem B. 2006 Oct 26;110(42):21245-50. doi: 10.1021/jp061673s.

Abstract

Using first-principles molecular dynamics simulations (Car-Parrinello method) we investigated the possible reaction pathways for decay of the active bleomycin-Fe(III)-OOH complex, so-called bleomycin suicide. The theoretical model of activated bleomycin contains the whole metal bonding domain of the bleomycin ligand. Simulations performed both in a vacuum and in water show that a facile decaying process involves a homolytic O-O bond cleavage with an almost simultaneous hydrogen atom abstraction. The formation of an intra- or intermolecular hydrogen bond appears to be crucial for the decay of the activated bleomycin. We did not observe any evidence of heterolytic cleavage of the O-O bond of the Fe(III)-OOH species.

摘要

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