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一种用于检测尖峰序列中脉冲串的非参数方法。

A nonparametric approach for detection of bursts in spike trains.

作者信息

Gourévitch Boris, Eggermont Jos J

机构信息

Department of Physiology and Biophysics, Department of Psychology, University of Calgary, 2500 University Drive N.W., Calgary, Alberta, Canada.

出版信息

J Neurosci Methods. 2007 Mar 15;160(2):349-58. doi: 10.1016/j.jneumeth.2006.09.024. Epub 2006 Oct 30.

Abstract

In spike-train data, bursts are considered as a unit of neural information and are of potential interest in studies of responses to any sensory stimulus. Consequently, burst detection appears to be a critical problem for which the Poisson-surprise (PS) method has been widely used for 20 years. However, this method has faced some recurrent criticism about the underlying assumptions regarding the interspike interval (ISI) distributions. In this paper, we avoid such assumptions by using a nonparametric approach for burst detection based on the ranks of ISI in the entire spike train. Similar to the PS statistic, a "Rank surprise" (RS) statistic is extracted. A new algorithm performing an exhaustive search of bursts in the spike trains is also presented. Compared to the performances of the PS method on realizations of gamma renewal processes and spike trains recorded in cat auditory cortex, we show that the RS method is very robust for any type of ISI distribution and is based on an elementary formalization of the definition of a burst. It presents an alternative to the PS method for non-Poisson spike trains and is simple to implement.

摘要

在脉冲序列数据中,爆发被视为神经信息的一个单元,并且在对任何感觉刺激的反应研究中具有潜在的研究价值。因此,爆发检测似乎是一个关键问题,泊松惊奇(PS)方法已被广泛使用了20年。然而,该方法一直面临着一些关于脉冲间隔(ISI)分布的潜在假设的反复批评。在本文中,我们通过使用一种基于整个脉冲序列中ISI秩次的非参数方法来进行爆发检测,从而避免了此类假设。类似于PS统计量,我们提取了一个“秩次惊奇”(RS)统计量。还提出了一种在脉冲序列中对爆发进行穷举搜索的新算法。与PS方法在伽马更新过程的实现以及猫听觉皮层中记录的脉冲序列上的性能相比,我们表明RS方法对于任何类型的ISI分布都非常稳健,并且基于爆发定义的基本形式化。它为非泊松脉冲序列提供了一种替代PS方法的选择,并且易于实现。

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