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T4噬菌体UvsW蛋白兼具DNA解旋和链退火活性。

The T4 phage UvsW protein contains both DNA unwinding and strand annealing activities.

作者信息

Nelson Scott W, Benkovic Stephen J

机构信息

Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania 16802, USA.

出版信息

J Biol Chem. 2007 Jan 5;282(1):407-16. doi: 10.1074/jbc.M608153200. Epub 2006 Nov 8.

Abstract

UvsW protein belongs to the SF2 helicase family and is one of three helicases found in T4 phage. UvsW governs the transition from origin-dependent to origin-independent replication through the dissociation of R-loops located at the T4 origins of replication. Additionally, in vivo evidence indicates that UvsW plays a role in recombination-dependent replication and/or DNA repair. Here, the biochemical properties of UvsW helicase are described. UvsW is a 3' to 5' helicase that unwinds a wide variety of substrates, including those resembling stalled replication forks and recombination intermediates. UvsW also contains a potent single-strand DNA annealing activity that is enhanced by ATP hydrolysis but does not require it. The annealing activity is inhibited by the non-hydrolysable ATP analog (adenosine 5'-O-(thiotriphosphate)), T4 single-stranded DNA-binding protein (gp32), or a small 8.8-kDa polypeptide (UvsW.1). Fluorescence resonance energy transfer experiments indicate that UvsW and UvsW.1 form a complex, suggesting that the UvsW helicase may exist as a heterodimer in vivo. Fusion of UvsW and UvsW.1 results in a 68-kDa protein having nearly identical properties as the UvsW-UvsW.1 complex, indicating that the binding locus of UvsW.1 is close to the C terminus of UvsW. The biochemical properties of UvsW are similar to the RecQ protein family and suggest that the annealing activity of these helicases may also be modulated by protein-protein interactions. The dual activities of UvsW are well suited for the DNA repair pathways described for leading strand lesion bypass and synthesis-dependent strand annealing.

摘要

UvsW蛋白属于SF2解旋酶家族,是T4噬菌体中发现的三种解旋酶之一。UvsW通过解离位于T4复制起点的R环,控制从依赖起点到不依赖起点的复制转变。此外,体内证据表明UvsW在依赖重组的复制和/或DNA修复中发挥作用。在此,描述了UvsW解旋酶的生化特性。UvsW是一种3'至5'解旋酶,可解开多种底物,包括那些类似于停滞的复制叉和重组中间体的底物。UvsW还具有强大的单链DNA退火活性,该活性可被ATP水解增强,但不需要ATP水解。退火活性受到不可水解的ATP类似物(腺苷5'-O-(硫代三磷酸))、T4单链DNA结合蛋白(gp32)或一种8.8 kDa的小多肽(UvsW.1)的抑制。荧光共振能量转移实验表明UvsW和UvsW.1形成复合物,这表明UvsW解旋酶在体内可能以异二聚体形式存在。UvsW和UvsW.1的融合产生一种68 kDa的蛋白质,其性质与UvsW-UvsW.1复合物几乎相同,这表明UvsW.1的结合位点靠近UvsW的C末端。UvsW的生化特性与RecQ蛋白家族相似,表明这些解旋酶的退火活性也可能受到蛋白质-蛋白质相互作用的调节。UvsW的双重活性非常适合用于前导链损伤旁路和合成依赖链退火所描述的DNA修复途径。

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