Shao Jin-Yu, Xu Gang
Department of Biomedical Engineering, Washington University, One Brookings Drive, St. Louis, MO 63130-4899, USA.
Ann Biomed Eng. 2007 Mar;35(3):397-407. doi: 10.1007/s10439-006-9221-6. Epub 2006 Dec 7.
In biology, specific cell adhesion is mediated by receptor-ligand interactions. Consequently, its strength correlates with the strength of single receptor-ligand bonds that can be measured with a variety of techniques. However, whether single receptor-ligand bonds are truly present in an experiment is often a concern. In this paper, we present a Monte Carlo simulation of the adhesion between a microvillus-bearing cell and a ligand-coated substrate. In the simulation, ligands were immobilized on the substrate either uniformly or in clusters of three and seven, while receptors were distributed uniformly on the microvillus tip and they moved randomly on the cellular surface. How ligand clustering affects the adhesion frequency and forward rate constant was studied. Other factors that were studied include receptor aggregation on the microvillus tip, ligand density, receptor density, contact time, and binding pocket size. In the case of uniformly distributed ligands, our simulation results agree well with those obtained from probabilistic analysis. We found that, even with clustered ligands on the substrate, most of the adhesion events were mediated by a single bond if the total adhesion frequency was less than 20%. Besides, ligand clustering decreased the total adhesion frequency and forward rate constant, but increased the single-bond adhesion frequency under comparable conditions. These findings should lend us some assistance in identifying single bonds in cell-substrate or cell-bead adhesion measurements and in illustrating some biological mechanisms that involve clustered ligands.
在生物学中,特定的细胞黏附是由受体 - 配体相互作用介导的。因此,其强度与可用多种技术测量的单个受体 - 配体键的强度相关。然而,在实验中单个受体 - 配体键是否真的存在往往是一个问题。在本文中,我们提出了一个带有微绒毛的细胞与配体包被底物之间黏附的蒙特卡罗模拟。在模拟中,配体以均匀或三个及七个成簇的形式固定在底物上,而受体均匀分布在微绒毛尖端并在细胞表面随机移动。研究了配体成簇如何影响黏附频率和正向速率常数。研究的其他因素包括微绒毛尖端的受体聚集、配体密度、受体密度、接触时间和结合口袋大小。在配体均匀分布的情况下,我们的模拟结果与从概率分析获得的结果非常吻合。我们发现,即使底物上的配体成簇,如果总黏附频率小于20%,大多数黏附事件也是由单个键介导的。此外,在可比条件下,配体成簇降低了总黏附频率和正向速率常数,但增加了单键黏附频率。这些发现应该有助于我们在细胞 - 底物或细胞 - 珠子黏附测量中识别单键,并阐明一些涉及成簇配体的生物学机制。