细菌核糖核苷酸还原酶基因中带有插入序列元件的罕见I组内含子。
Rare group I intron with insertion sequence element in a bacterial ribonucleotide reductase gene.
作者信息
Meng Qing, Zhang Yi, Liu Xiang-Qin
机构信息
Institute of Biologial Sciences and Biotechnology, Donghua University, Shanghai, China.
出版信息
J Bacteriol. 2007 Mar;189(5):2150-4. doi: 10.1128/JB.01424-06. Epub 2006 Dec 15.
Abstract
A rare group I intron in a cyanobacterial ribonucleotide reductase gene has been characterized. It contains a mobile insertion sequence element not required for RNA splicing. Ribonucleotide reductase genes were found to be hot spots for all three types of self-splicing intervening sequences, including group I and II introns and inteins.
摘要
已对蓝藻核糖核苷酸还原酶基因中一个罕见的I组内含子进行了表征。它包含一个RNA剪接不需要的移动插入序列元件。核糖核苷酸还原酶基因被发现是所有三种类型的自我剪接间隔序列的热点，包括I组和II组内含子以及内含肽。
相似文献
1
Rare group I intron with insertion sequence element in a bacterial ribonucleotide reductase gene.
J Bacteriol. 2007 Mar;189(5):2150-4. doi: 10.1128/JB.01424-06. Epub 2006 Dec 15.
2
Four inteins and three group II introns encoded in a bacterial ribonucleotide reductase gene.
J Biol Chem. 2003 Nov 21;278(47):46826-31. doi: 10.1074/jbc.M309575200. Epub 2003 Sep 15.
3
Isolation and characterization of EMS induced splicing defective point mutations within the intron of the nrdB gene of bacteriophage T4.
Biochem Biophys Res Commun. 1998 Jan 6;242(1):10-5. doi: 10.1006/bbrc.1997.7553.
4
Insertion of a homing endonuclease creates a genes-in-pieces ribonucleotide reductase that retains function.
Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6176-81. doi: 10.1073/pnas.0609915104. Epub 2007 Mar 29.
5
Cloning and sequencing of cDNAs encoding ribonucleotide reductase from zebrafish Danio rerio.
Mol Mar Biol Biotechnol. 1996 Dec;5(4):284-7.
6
The phage T4 nrdB intron: a deletion mutant of a version found in the wild.
Genes Dev. 1991 Jun;5(6):1032-41. doi: 10.1101/gad.5.6.1032.
7
Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences.
Nucleic Acids Res. 2001 Aug 1;29(15):3212-8. doi: 10.1093/nar/29.15.3212.
8
Subspecies-specific distribution of intervening sequences in the Bacillus subtilis prophage ribonucleotide reductase genes.
Syst Appl Microbiol. 2007 Jan;30(1):8-15. doi: 10.1016/j.syapm.2006.02.007. Epub 2006 Apr 18.
9
Two self-splicing group I introns in the ribonucleotide reductase large subunit gene of Staphylococcus aureus phage Twort.
Nucleic Acids Res. 2002 May 1;30(9):1935-43. doi: 10.1093/nar/30.9.1935.
10
Characteristics of inteins in invertebrate iridoviruses and factors controlling insertion in their viral hosts.
Mol Phylogenet Evol. 2013 Apr;67(1):246-54. doi: 10.1016/j.ympev.2013.01.017. Epub 2013 Feb 7.
引用本文的文献
1
Rapid functional activation of horizontally transferred eukaryotic intron-containing genes in the bacterial recipient.
Nucleic Acids Res. 2024 Aug 12;52(14):8344-8355. doi: 10.1093/nar/gkae628.
2
Survey of chimeric IStron elements in bacterial genomes: multiple molecular symbioses between group I intron ribozymes and DNA transposons.
Nucleic Acids Res. 2014 Nov 10;42(20):12333-51. doi: 10.1093/nar/gku939. Epub 2014 Oct 16.
3
Bacterial group I introns: mobile RNA catalysts.
Mob DNA. 2014 Mar 10;5(1):8. doi: 10.1186/1759-8753-5-8.
4
Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39.
DNA Res. 2010 Apr;17(2):85-103. doi: 10.1093/dnares/dsq004. Epub 2010 Mar 4.
5
Group I introns and inteins: disparate origins but convergent parasitic strategies.
J Bacteriol. 2009 Oct;191(20):6193-202. doi: 10.1128/JB.00675-09. Epub 2009 Aug 7.
6
Cyanobacterial ribosomal RNA genes with multiple, endonuclease-encoding group I introns.
BMC Evol Biol. 2007 Sep 8;7:159. doi: 10.1186/1471-2148-7-159.
本文引用的文献
1
Atomic level architecture of group I introns revealed.
Trends Biochem Sci. 2006 Jan;31(1):41-51. doi: 10.1016/j.tibs.2005.11.008. Epub 2005 Dec 13.
2
The natural history of group I introns.
Trends Genet. 2005 Feb;21(2):111-9. doi: 10.1016/j.tig.2004.12.007.
3
Four inteins and three group II introns encoded in a bacterial ribonucleotide reductase gene.
J Biol Chem. 2003 Nov 21;278(47):46826-31. doi: 10.1074/jbc.M309575200. Epub 2003 Sep 15.
4
Mfold web server for nucleic acid folding and hybridization prediction.
Nucleic Acids Res. 2003 Jul 1;31(13):3406-15. doi: 10.1093/nar/gkg595.
5
Isolation of the gene for the B12-dependent ribonucleotide reductase from Anabaena sp. strain PCC 7120 and expression in Escherichia coli.
J Bacteriol. 2002 Dec;184(23):6544-50. doi: 10.1128/JB.184.23.6544-6550.2002.
6
Group I self-splicing intron in the recA gene of Bacillus anthracis.
J Bacteriol. 2002 Jul;184(14):3917-22. doi: 10.1128/JB.184.14.3917-3922.2002.
7
The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer.
Nat Struct Biol. 2002 Apr;9(4):293-300. doi: 10.1038/nsb774.
8
Ribonucleotide reductase genes of Bacillus prophages: a refuge to introns and intein coding sequences.
Nucleic Acids Res. 2001 Aug 1;29(15):3212-8. doi: 10.1093/nar/29.15.3212.
9
Double-hairpin elements in the mitochondrial DNA of allomyces: evidence for mobility.
Mol Biol Evol. 2000 Nov;17(11):1760-8. doi: 10.1093/oxfordjournals.molbev.a026274.
10
Barriers to intron promiscuity in bacteria.
J Bacteriol. 2000 Oct;182(19):5281-9. doi: 10.1128/JB.182.19.5281-5289.2000.
Zotero 插件