Wichmann Karin, Diedenhofen Michael, Klamt Andreas
COSMOlogic GmbH & Co. KG, Burscheider Strasse 515, 51381 Leverkusen, Germany.
J Chem Inf Model. 2007 Jan-Feb;47(1):228-33. doi: 10.1021/ci600385w.
Models for the prediction of blood-brain partitioning (logBB) and human serum albumin binding (logK(HSA)) of neutral molecules were developed using the set of 5 COSMO-RS sigma-moments as descriptors. These sigma-moments have already been introduced earlier as a general descriptor set for partition coefficients. They are obtained from quantum chemical calculations using the continuum solvation model COSMO and a subsequent statistical decomposition of the resulting polarization charge densities. The model for blood-brain partitioning was built on a data set of 103 compounds and yielded a correlation coefficient of r2 = 0.71 and an rms error of 0.40 log units. The human serum albumin binding model was built on a data set of 92 compounds and achieved an r2 of 0.67 and an rms error of 0.33 log units. Both models were validated by leave-one-out cross-validation tests, which resulted in q2 = 0.68 and a qms error of 0.42 for the logBB model and in q2 = 0.63 and a qms error of 0.35 for the logK(HSA) model. Together with the previously published models for intestinal absorption and for drug solubility the presented two models complete the COSMO-RS based set of ADME prediction models.
利用5个COSMO-RS西格玛矩作为描述符,开发了预测中性分子血脑分配(logBB)和人血清白蛋白结合(logK(HSA))的模型。这些西格玛矩先前已作为分配系数的通用描述符集引入。它们通过使用连续溶剂化模型COSMO的量子化学计算以及对所得极化电荷密度的后续统计分解获得。血脑分配模型基于103种化合物的数据集构建,相关系数r2 = 0.71,均方根误差为0.40对数单位。人血清白蛋白结合模型基于92种化合物的数据集构建,r2为0.67,均方根误差为0.33对数单位。两个模型均通过留一法交叉验证测试进行验证,logBB模型的q2 = 0.68,qms误差为0.42;logK(HSA)模型的q2 = 0.63,qms误差为0.35。与先前发表的肠道吸收和药物溶解度模型一起,所提出的这两个模型完善了基于COSMO-RS的ADME预测模型集。