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有限岛屿模型中种群的基因同源性和遗传分化。

Gene identity and genetic differentiation of populations in the finite island model.

机构信息

National Institute of Genetics, Mishima, Shizuoka-ken, 411 Japan.

出版信息

Genetics. 1983 Jul;104(3):497-512. doi: 10.1093/genetics/104.3.497.

DOI:10.1093/genetics/104.3.497
PMID:17246145
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1202091/
Abstract

A formula for the variance of gene identity (homozygosity) was derived for the case of neutral mutations using diffusion approximations for the changes of gene frequencies in a subdivided population. It is shown that when gene flow is extremely small, the variance of gene identity for the entire population at equilibrium is smaller than that of the panmictic population with the same mean gene identity. On the other hand, although a large amount of gene flow makes a subdivided population equivalent to a panmictic population, there is an intermediate range of gene flow in which population subdivision can increase the variance. This increase results from the increased variance between colonies. In such a case, each colony has a predominant allele, but the predominant type may differ from colony to colony. The formula for obtaining the variance allows us to study such statistics as the coefficient of gene differentiation and the correlation of heterozygosity. Computer simulations were conducted to study the distribution of gene identity as well as to check the validity of the analytical formulas. Effects of selection were also studied by simulations.

摘要

推导了在分裂种群中使用扩散近似来计算中性突变下基因同质性(杂合性)方差的公式。结果表明,当基因流非常小时,平衡状态下整个种群的基因同质性方差小于具有相同平均基因同质性的随机交配种群的方差。另一方面,尽管大量的基因流使得分裂种群等同于随机交配种群,但在中间范围的基因流中,种群分裂会增加方差。这种增加是由于群体间方差的增加所致。在这种情况下,每个群体都有一个主要等位基因,但主要类型可能因群体而异。获得方差的公式使我们能够研究基因分化系数和杂合度相关性等统计数据。通过计算机模拟研究了基因同质性的分布,并检验了分析公式的有效性。还通过模拟研究了选择的影响。

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Gene identity and genetic differentiation of populations in the finite island model.有限岛屿模型中种群的基因同源性和遗传分化。
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本文引用的文献

1
The Stepping Stone Model of Population Structure and the Decrease of Genetic Correlation with Distance.种群结构的踏脚石模型与遗传相关性随距离的降低
Genetics. 1964 Apr;49(4):561-76. doi: 10.1093/genetics/49.4.561.
2
Testing neutrality in subdivided populations.检测细分群体中的中性。
Genetics. 1982 Mar;100(3):533-45. doi: 10.1093/genetics/100.3.533.
3
Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent.遗传变异性和有效种群规模,当亚种群的局部灭绝和再定居频繁发生时。
Proc Natl Acad Sci U S A. 1980 Nov;77(11):6710-4. doi: 10.1073/pnas.77.11.6710.
4
THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.有限种群中能够维持的等位基因数量。
Genetics. 1964 Apr;49(4):725-38. doi: 10.1093/genetics/49.4.725.
5
Selective constraint in protein polymorphism: study of the effectively neutral mutation model by using an improved pseudosampling method.蛋白质多态性中的选择限制:通过改进的伪抽样方法对有效中性突变模型的研究。
Proc Natl Acad Sci U S A. 1983 Feb;80(4):1048-52. doi: 10.1073/pnas.80.4.1048.
6
Evolutionary rate at the molecular level.分子水平的进化速率。
Nature. 1968 Feb 17;217(5129):624-6. doi: 10.1038/217624a0.
7
Analysis of population structure. I. One-dimensional stepping-stone models of finite length.
Ann Hum Genet. 1970 Oct;34(2):201-19. doi: 10.1111/j.1469-1809.1970.tb00235.x.
8
Genetic drift in clines which are maintained by migration and natural selection.由迁移和自然选择维持的渐变群中的遗传漂变。
Genetics. 1975 Sep;81(1):191-207. doi: 10.1093/genetics/81.1.191.
9
Infinite allele model with varying mutation rate.具有可变突变率的无限等位基因模型。
Proc Natl Acad Sci U S A. 1976 Nov;73(11):4164-8. doi: 10.1073/pnas.73.11.4164.
10
Statistical studies on protein polymorphism in natural populations. I. Distribution of single locus heterozygosity.自然种群中蛋白质多态性的统计研究。I. 单基因座杂合性的分布
Genetics. 1977 Jun;86(2 Pt. 1):455-83.