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有限自交群体中的连锁不平衡。

Linkage disequilibrium in a finite population that is partially selfing.

机构信息

Department of Genetics, University of Alberta, Edmonton, Alberta, Canada T6G 2E9.

出版信息

Genetics. 1980 Mar;94(3):777-89. doi: 10.1093/genetics/94.3.777.

DOI:10.1093/genetics/94.3.777
PMID:17249017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1214174/
Abstract

The linkage disequilibrium expected in a finite, partially selfing population is analyzed, assuming the infinite allele model. Formulas for the expected sum of squares of the linkage disequilibria and the squared standard linkage disequilibrium are derived from the equilibrium values of sixteen inbreeding coefficients required to describe the behavior of the system. These formulas are identical to those obtained with random mating if the effective population size N(e) = (1-(1/2)S)N and the effective recombination value r(e) = (1-S)r/(1-(1/2)S), where S is the proportion of selfing, are substituted for the population size and the recombination value. Therefore, the effect of partial selfing at equilibrium is to reduce the population size by a factor 1-(1/2)S and the recombination value by a factor (1-S)/(1-(1/2)S).

摘要

在有限的部分自交群体中,分析了连锁不平衡的预期情况,假设无限等位基因模型。从描述系统行为所需的十六个近交系数的平衡值中推导出连锁不平衡和平方标准连锁不平衡的预期平方和的公式。如果将有效群体大小 N(e) = (1-(1/2)S)N 和有效重组值 r(e) = (1-S)r/(1-(1/2)S)代入群体大小和重组值,这些公式与随机交配时获得的公式相同,其中 S 是自交的比例。因此,平衡时部分自交的影响是将群体大小减少 1-(1/2)S 的因子,将重组值减少(1-S)/(1-(1/2)S)的因子。

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本文引用的文献

1
The effect of intragenic recombination on the number of alleles in a finite population.基因内重组对有限群体中等位基因数量的影响。
Genetics. 1978 Apr;88(4):829-44. doi: 10.1093/genetics/88.4.829.
2
Analysis of complex allozyme polymorphisms in a barley population.分析大麦群体中的复杂同工酶多态性。
Genetics. 1972 Nov;72(3):505-23. doi: 10.1093/genetics/72.3.505.
3
The effect of selection on esterase allozymes in a barley population.选择对大麦群体中酯酶同工酶的影响。
Genetics. 1972 Nov;72(3):489-503. doi: 10.1093/genetics/72.3.489.
4
Maintenance of Isozyme Polymorphisms in Natural Populations of AVENA BARBATA.野燕麦自然种群中同工酶多态性的维持
Genetics. 1970 Oct;66(2):393-9. doi: 10.1093/genetics/66.2.393.
5
Microgeographical Variation in Allozyme Frequencies in Avena barbata.野燕麦等位酶频率的微观地理变异
Proc Natl Acad Sci U S A. 1972 Aug;69(8):2100-4. doi: 10.1073/pnas.69.8.2100.
6
Evidence for coadaptation in Avena barbata.燕麦(Avena barbata)中协同适应的证据。
Proc Natl Acad Sci U S A. 1972 Oct;69(10):3043-8. doi: 10.1073/pnas.69.10.3043.
7
An application of kinship process to the gene frequencies: linkage disequilibrium due to random drift in mendelian genetics with reversible mutation and in molecular genetics.亲缘关系过程在基因频率中的应用:孟德尔遗传学中具有可逆突变的随机漂变以及分子遗传学中的连锁不平衡。
Theor Popul Biol. 1976 Feb;9(1):1-11. doi: 10.1016/0040-5809(76)90030-7.
8
Linkage disequilibrium among multiple neutral alleles produced by mutation in finite population.有限群体中由突变产生的多个中性等位基因间的连锁不平衡。
Theor Popul Biol. 1975 Oct;8(2):117-26. doi: 10.1016/0040-5809(75)90028-3.
9
Linkage disequilibrium in natural populations of Drosophila melanogaster Seasonal variation.黑腹果蝇自然种群中的连锁不平衡 季节变化
Genetics. 1977 Jun;86(2 Pt. 1):447-54.