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深海芽孢杆菌新种,从深海沉积物岩芯中分离得到。

Oceanobacillus profundus sp. nov., isolated from a deep-sea sediment core.

作者信息

Kim Yoon-Gon, Choi Dong Han, Hyun Sangmin, Cho Byung Cheol

机构信息

School of Earth and Environmental Sciences and Research Institute of Oceanography, Seoul National University, San 56-1 Shillim-dong, Kwanak-gu, Seoul 151-742, Republic of Korea.

South Sea Institute/Korea Ocean Research and Development Institute (KORDI), 391 Jang mok-ri, Jangmok-myon, Geoje 656-830, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2007 Feb;57(Pt 2):409-413. doi: 10.1099/ijs.0.64375-0.

Abstract

A halotolerant, facultatively alkaliphilic bacterium, designated CL-MP28T, was isolated from the surface of a sediment core sample collected at a depth of 2247 m in the Ulleung Basin of the East Sea, Korea. Phylogenetic analysis of the 16S rRNA gene sequence of strain CL-MP28T revealed an affiliation with the genus Oceanobacillus. The sequence similarities between the isolate and type strains of members of the genus Oceanobacillus were in the range 95.0-96.0 %, indicating that strain CL-MP28T represented a novel species within the genus. The strain was found to be Gram-positive, rod-shaped and motile by means of peritrichous flagella and was shown to produce ellipsoidal spores. The strain was strictly aerobic and able to grow with NaCl at concentrations in the range 0-14 % (w/v) at pH 7.5. The strain grew at temperatures of 15-42 degrees C and at pH 6.5-9.5. The major fatty acids were anteiso-C(15 : 0) (64.9 %), anteiso-C(17 : 0) (11.9 %) and iso-C(16 : 0) (7.7 %). The major isoprenoid quinone was MK-7. The DNA G+C content was 40.2 mol%. According to the 16S rRNA gene sequence, DNA-DNA relatedness and physiological data and the fatty acid composition, CL-MP28T could be assigned to the genus Oceanobacillus, but is distinguishable from the recognized species of this genus. Strain CL-MP28T therefore represents a novel species within the genus Oceanobacillus, for which the name Oceanobacillus profundus sp. nov. is proposed. The type strain is CL-MP28T (=KCCM 42318T=DSM 18246T).

摘要

从韩国东海郁陵盆地2247米深处采集的沉积物岩芯样本表面分离出一株耐盐兼性嗜碱细菌,命名为CL-MP28T。对菌株CL-MP28T的16S rRNA基因序列进行系统发育分析,结果表明它与嗜盐芽孢杆菌属相关。该分离株与嗜盐芽孢杆菌属成员的模式菌株之间的序列相似性在95.0%-96.0%之间,这表明菌株CL-MP28T代表了该属内的一个新物种。该菌株为革兰氏阳性,杆状,通过周生鞭毛运动,能产生椭圆形孢子。该菌株为严格需氧菌,在pH 7.5时,能够在0-14%(w/v)的NaCl浓度范围内生长。该菌株在15-42℃和pH 6.5-9.5的条件下生长。主要脂肪酸为anteiso-C(15 : 0)(64.9%)、anteiso-C(17 : 0)(11.9%)和iso-C(16 : 0)(7.7%)。主要类异戊二烯醌为MK-7。DNA G+C含量为40.2 mol%。根据16S rRNA基因序列、DNA-DNA相关性、生理数据和脂肪酸组成,CL-MP28T可归为嗜盐芽孢杆菌属,但与该属已确认的物种不同。因此,菌株CL-MP28T代表嗜盐芽孢杆菌属内的一个新物种,提议将其命名为深海嗜盐芽孢杆菌(Oceanobacillus profundus sp. nov.)。模式菌株为CL-MP28T(=KCCM 42318T=DSM 18246T)。

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