Minezawa Noriyuki, Kato Shigeki
Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa, Sakyo-ku, Kyoto 606-8502, Japan.
J Chem Phys. 2007 Feb 7;126(5):054511. doi: 10.1063/1.2431809.
The authors present an implementation of the three-dimensional reference interaction site model self-consistent-field (3D-RISM-SCF) method. First, they introduce a robust and efficient algorithm for solving the 3D-RISM equation. The algorithm is a hybrid of the Newton-Raphson and Picard methods. The Jacobian matrix is analytically expressed in a computationally useful form. Second, they discuss the solute-solvent electrostatic interaction. For the solute to solvent route, the electrostatic potential (ESP) map on a 3D grid is constructed directly from the electron density. The charge fitting procedure is not required to determine the ESP. For the solvent to solute route, the ESP acting on the solute molecule is derived from the solvent charge distribution obtained by solving the 3D-RISM equation. Matrix elements of the solute-solvent interaction are evaluated by the direct numerical integration. A remarkable reduction in the computational time is observed in both routes. Finally, the authors implement the first derivatives of the free energy with respect to the solute nuclear coordinates. They apply the present method to "solute" water and formaldehyde in aqueous solvent using the simple point charge model, and the results are compared with those from other methods: the six-dimensional molecular Ornstein-Zernike SCF, the one-dimensional site-site RISM-SCF, and the polarizable continuum model. The authors also calculate the solvatochromic shifts of acetone, benzonitrile, and nitrobenzene using the present method and compare them with the experimental and other theoretical results.
作者介绍了三维参考相互作用位点模型自洽场(3D-RISM-SCF)方法的一种实现。首先,他们引入了一种用于求解3D-RISM方程的稳健且高效的算法。该算法是牛顿-拉夫森方法和皮卡德方法的混合。雅可比矩阵以一种对计算有用的形式进行解析表达。其次,他们讨论了溶质-溶剂静电相互作用。对于溶质到溶剂的路径,三维网格上的静电势(ESP)图直接由电子密度构建。确定ESP不需要电荷拟合过程。对于溶剂到溶质的路径,作用于溶质分子的ESP由通过求解3D-RISM方程获得的溶剂电荷分布导出。溶质-溶剂相互作用的矩阵元素通过直接数值积分进行评估。在两条路径中都观察到计算时间显著减少。最后,作者实现了自由能相对于溶质核坐标的一阶导数。他们使用简单点电荷模型将本方法应用于水溶液中的“溶质”水和甲醛,并将结果与其他方法的结果进行比较:六维分子奥恩斯坦-泽尼克自洽场、一维位点-位点RISM-SCF和极化连续介质模型。作者还使用本方法计算了丙酮、苯甲腈和硝基苯的溶剂化显色位移,并将它们与实验结果和其他理论结果进行比较。