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De novo methylation, long-term promoter silencing, methylation patterns in the human genome, and consequences of foreign DNA insertion.从头甲基化、长期启动子沉默、人类基因组中的甲基化模式以及外源DNA插入的后果。
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Epigenetic regulation of metallothionein-i gene expression: differential regulation of methylated and unmethylated promoters by DNA methyltransferases and methyl CpG binding proteins.金属硫蛋白 - I 基因表达的表观遗传调控:DNA 甲基转移酶和甲基 CpG 结合蛋白对甲基化和未甲基化启动子的差异调控。
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人类α1d-肾上腺素能受体基因表达的表观遗传调控:DNA甲基化在Sp1依赖性调控中的作用

Epigenetic regulation of human alpha1d-adrenergic receptor gene expression: a role for DNA methylation in Sp1-dependent regulation.

作者信息

Michelotti Gregory A, Brinkley D Marshall, Morris Daniel P, Smith Michael P, Louie Raphael J, Schwinn Debra A

机构信息

Department of Pharmacology/Cancer Biology, Duke University Medical Center, Durham, NC 27710, USA.

出版信息

FASEB J. 2007 Jul;21(9):1979-93. doi: 10.1096/fj.06-7118com. Epub 2007 Mar 23.

DOI:10.1096/fj.06-7118com
PMID:17384146
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2279228/
Abstract

A growing body of evidence implicates alpha1-adrenergic receptors (alpha1ARs) as potent regulators of growth pathways. The three alpha1AR subtypes (alpha1aAR, alpha1bAR, alpha1dAR) display highly restricted tissue expression that undergoes subtype switching with many pathological stimuli, the mechanistic basis of which remains unknown. To gain insight into transcriptional pathways governing cell-specific regulation of the human alpha1dAR subtype, we cloned and characterized the alpha1dAR promoter region in two human cellular models that display disparate levels of endogenous alpha1dAR expression (SK-N-MC and DU145). Results reveal that alpha1dAR basal expression is regulated by Sp1-dependent binding of two promoter-proximal GC boxes, the mutation of which attenuates alpha1dAR promoter activity 10-fold. Mechanistically, chromatin immunoprecipitation data demonstrate that Sp1 binding correlates with expression of the endogenous gene in vivo, correlating highly with alpha1dAR promoter methylation-dependent silencing of both episomally expressed reporter constructs and the endogenous gene. Further, analysis of methylation status of proximal GC boxes using sodium bisulfite sequencing reveals differential methylation of proximal GC boxes in the two cell lines examined. Together, the data support a mechanism of methylation-dependent disruption of Sp1 binding in a cell-specific manner resulting in repression of basal alpha1dAR expression.

摘要

越来越多的证据表明,α1 - 肾上腺素能受体(α1ARs)是生长途径的有效调节因子。三种α1AR亚型(α1aAR、α1bAR、α1dAR)表现出高度受限的组织表达,在许多病理刺激下会发生亚型转换,但其机制基础尚不清楚。为了深入了解调控人类α1dAR亚型细胞特异性调节的转录途径,我们在两种内源性α1dAR表达水平不同的人类细胞模型(SK - N - MC和DU145)中克隆并表征了α1dAR启动子区域。结果表明,α1dAR的基础表达受两个启动子近端GC盒的Sp1依赖性结合调控,其突变会使α1dAR启动子活性减弱10倍。从机制上讲,染色质免疫沉淀数据表明,Sp1结合与体内内源性基因的表达相关,与游离表达的报告基因构建体和内源性基因的α1dAR启动子甲基化依赖性沉默高度相关。此外,使用亚硫酸氢钠测序分析近端GC盒的甲基化状态,发现在所检测的两种细胞系中近端GC盒存在差异甲基化。总之,这些数据支持一种以细胞特异性方式依赖甲基化破坏Sp1结合从而导致基础α1dAR表达受到抑制的机制。