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用于同时分析常见α地中海贫血点突变和缺失的反向杂交条带分析法的验证

Validation of a reverse-hybridization StripAssay for the simultaneous analysis of common alpha-thalassemia point mutations and deletions.

作者信息

Puehringer Helene, Najmabadi Hossein, Law Hai-Yang, Krugluger Walter, Viprakasit Vip, Pissard Serge, Baysal Erol, Taher Ali, Farra Chantal, Al-Ali Amein, Al-Ateeq Suad, Oberkanins Christian

机构信息

ViennaLab Diagnostics GmbH, Vienna, Austria.

出版信息

Clin Chem Lab Med. 2007;45(5):605-10. doi: 10.1515/CCLM.2007.125.

DOI:10.1515/CCLM.2007.125
PMID:17484620
Abstract

BACKGROUND

alpha-Thalassemia is a worldwide disease and considered to be a major public health problem in countries within the so-called thalassemia belt. The complex genetics of alpha-thalassemias requires diagnostic methods with the capacity to screen rapidly and accurately for common causative mutations.

METHODS

We developed and validated a reverse-hybridization assay (Alpha-Globin StripAssay) for the rapid and simultaneous detection of 21 alpha-globin mutations: two single gene deletions (-alpha(3.7); -alpha(4.2)), five double gene deletions [--(MED); --(SEA); --(THAI); --(FIL); -(alpha)(20.5)], alpha alpha alpha(anti-3.7) gene triplication, two point mutations in the alpha1 gene (cd 14 G>A; Hb Adana) and 11 point mutations in the alpha2 gene (initiation cd T>C; cd 19 -G; IVS1 -5nt; cd 59 G>A; Hb Quong Sze; Hb Constant Spring; Hb Icaria; Hb Pakse; Hb Koya Dora; polyA-1; polyA-2).

RESULTS

Reliable genotyping of recombinant mutant clones and reference DNA samples was achieved by means of two corresponding test strips presenting parallel arrays of allele-specific oligonucleotides. The entire procedure from blood sampling to the identification of mutations required less than 6 h, and hybridization/detection was manual or automated. The diagnostic potential of this Alpha-Globin StripAssay was carefully evaluated on 272 pre-typed samples in a multicenter validation study. In 96.14% of the cases, StripAssay typing was completely concordant with the reference methods.

CONCLUSIONS

The Alpha-Globin StripAssay proved to be a fast, easy-to-perform and reliable screening method to identify >90% of alpha-globin mutations in endemic areas worldwide.

摘要

背景

α地中海贫血是一种全球性疾病,在所谓的地中海贫血带国家被视为一个主要的公共卫生问题。α地中海贫血复杂的遗传学特性需要具备快速、准确筛查常见致病突变能力的诊断方法。

方法

我们开发并验证了一种反向杂交检测法(α珠蛋白条带检测法),用于快速同时检测21种α珠蛋白突变:两种单基因缺失(-α(3.7);-α(4.2))、五种双基因缺失[--(MED);--(SEA);--(THAI);--(FIL);-(α)(20.5)]、ααα(抗-3.7)基因三倍体、α1基因中的两种点突变(第14密码子G>A;Hb阿德纳)以及α2基因中的11种点突变(起始密码子T>C;第19密码子-G;内含子1 -5nt;第59密码子G>A;Hb泉寺;Hb Constant Spring;Hb伊卡里亚;Hb巴色;Hb小田原;多聚腺苷酸-1;多聚腺苷酸-2)。

结果

通过两条呈现等位基因特异性寡核苷酸平行阵列的相应检测条带,实现了重组突变克隆和参考DNA样本的可靠基因分型。从采血到突变鉴定的整个过程耗时不到6小时,杂交/检测可手动或自动进行。在一项多中心验证研究中,对272个预先分型的样本仔细评估了这种α珠蛋白条带检测法的诊断潜力。在96.14%的病例中,条带检测法分型与参考方法完全一致。

结论

α珠蛋白条带检测法被证明是一种快速、易于操作且可靠的筛查方法,可用于识别全球流行地区90%以上的α珠蛋白突变。

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