• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

癌症中RNA可变剪接的基因组分析。

Genomic analysis of RNA alternative splicing in cancers.

作者信息

Xing Yi

机构信息

Department of Internal Medicine, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242, USA.

出版信息

Front Biosci. 2007 May 1;12:4034-41. doi: 10.2741/2369.

DOI:10.2741/2369
PMID:17485356
Abstract

Alternative splicing is an important and prevalent mechanism of gene regulation in higher eukaryotes. Nearly three quarters of human multi-exon genes are alternatively spliced. There is great interest in discovering alternative splicing events in the transcriptome of cancer cells, and in understanding how alternative splicing contributes to tumorigenesis. In this article, I will review recent advances in global analyses of pre-mRNA alternative splicing, and the applications of these genomic technologies to studies of alternative splicing in human cancers.

摘要

可变剪接是高等真核生物中一种重要且普遍的基因调控机制。近四分之三的人类多外显子基因会发生可变剪接。人们对在癌细胞转录组中发现可变剪接事件,以及了解可变剪接如何促进肿瘤发生非常感兴趣。在本文中,我将综述前体mRNA可变剪接全局分析的最新进展,以及这些基因组技术在人类癌症可变剪接研究中的应用。

相似文献

1
Genomic analysis of RNA alternative splicing in cancers.癌症中RNA可变剪接的基因组分析。
Front Biosci. 2007 May 1;12:4034-41. doi: 10.2741/2369.
2
Detection of Alternatively Spliced or Processed RNAs in Cancer Using Oligonucleotide Microarray.
Cancer Treat Res. 2013;158:25-40. doi: 10.1007/978-3-642-31659-3_2.
3
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays.利用外显子连接微阵列对人类可变前体信使核糖核酸剪接进行全基因组调查。
Science. 2003 Dec 19;302(5653):2141-4. doi: 10.1126/science.1090100.
4
Discovery of tissue-specific exons using comprehensive human exon microarrays.使用综合人类外显子微阵列发现组织特异性外显子。
Genome Biol. 2007;8(4):R64. doi: 10.1186/gb-2007-8-4-r64.
5
RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays.RASA:人类转录组阵列的稳健可变剪接分析
Sci Rep. 2015 Jul 6;5:11917. doi: 10.1038/srep11917.
6
Alternative splicing in cancers: From aberrant regulation to new therapeutics.癌症中的可变剪接:从异常调控到新的治疗策略。
Semin Cell Dev Biol. 2018 Mar;75:13-22. doi: 10.1016/j.semcdb.2017.09.018. Epub 2017 Sep 14.
7
RNA sequencing and transcriptome arrays analyses show opposing results for alternative splicing in patient derived samples.RNA测序和转录组阵列分析显示,在患者来源的样本中,可变剪接的结果相反。
BMC Genomics. 2017 Jun 6;18(1):443. doi: 10.1186/s12864-017-3819-y.
8
Alternative RNA splicing defects in pediatric cancers: new insights in tumorigenesis and potential therapeutic vulnerabilities.儿科癌症中的选择性 RNA 剪接缺陷:肿瘤发生中的新见解和潜在的治疗弱点。
Ann Oncol. 2022 Jun;33(6):578-592. doi: 10.1016/j.annonc.2022.03.011. Epub 2022 Mar 23.
9
Analysis of isoform expression from splicing array using multiple comparisons.使用多重比较分析来自剪接阵列的异构体表达。
Methods Mol Biol. 2012;802:113-21. doi: 10.1007/978-1-61779-400-1_8.
10
An exon-centric perspective.外显子中心视角。
Biochem Cell Biol. 2012 Oct;90(5):603-12. doi: 10.1139/o2012-019. Epub 2012 Jul 11.

引用本文的文献

1
Revealing the Determinants of Widespread Alternative Splicing Perturbation in Cancer.揭示癌症中广泛的可变剪接扰动的决定因素。
Cell Rep. 2017 Oct 17;21(3):798-812. doi: 10.1016/j.celrep.2017.09.071.
2
The well-accepted notion that gene amplification contributes to increased expression still remains, after all these years, a reasonable but unproven assumption.基因扩增导致表达增加这一被广泛接受的观念,历经这么多年,仍然只是一个合理但未经证实的假设。
J Carcinog. 2016 May 20;15:3. doi: 10.4103/1477-3163.182809. eCollection 2016.
3
Regulation of chemoresistance via alternative messenger RNA splicing.
通过选择性信使 RNA 剪接调节化学耐药性。
Biochem Pharmacol. 2012 Apr 15;83(8):1063-72. doi: 10.1016/j.bcp.2011.12.041. Epub 2012 Jan 8.
4
Evolution of SR protein and hnRNP splicing regulatory factors.SR 蛋白和 hnRNP 剪接调控因子的进化。
Wiley Interdiscip Rev RNA. 2012 Jan-Feb;3(1):1-12. doi: 10.1002/wrna.100. Epub 2011 Sep 2.
5
Predicting functional alternative splicing by measuring RNA selection pressure from multigenome alignments.基于多基因组比对来衡量 RNA 选择压力预测功能选择性剪接。
PLoS Comput Biol. 2009 Dec;5(12):e1000608. doi: 10.1371/journal.pcbi.1000608. Epub 2009 Dec 18.
6
Identification of a novel nuclear localization signal and speckle-targeting sequence of tuftelin-interacting protein 11, a splicing factor involved in spliceosome disassembly.鉴定一种新型核定位信号以及与牙本质基质蛋白1相互作用蛋白11的斑点靶向序列,该蛋白是一种参与剪接体拆卸的剪接因子。
Biochem Biophys Res Commun. 2009 Dec 18;390(3):1044-50. doi: 10.1016/j.bbrc.2009.10.111. Epub 2009 Oct 24.
7
CCK(2) receptor splice variant with intron 4 retention in human gastrointestinal and lung tumours.人类胃肠道和肺部肿瘤中保留内含子 4 的 CCK(2)受体剪接变异体。
J Cell Mol Med. 2010 Apr;14(4):933-43. doi: 10.1111/j.1582-4934.2009.00859.x. Epub 2009 Jul 20.