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基于子实体和混合根系的rDNA序列分析,对干旱栎树林中外生菌根群落结构的研究

Ectomycorrhizal community structure in a xeric Quercus woodland based on rDNA sequence analysis of sporocarps and pooled roots.

作者信息

Smith Matthew E, Douhan Greg W, Rizzo David M

机构信息

Department of Plant Pathology, University of California at Davis, Davis CA 95616, USA.

Department of Plant Pathology, University of California at Riverside, Riverside CA 92521, USA.

出版信息

New Phytol. 2007;174(4):847-863. doi: 10.1111/j.1469-8137.2007.02040.x.

Abstract

Quercus woodlands are key components of California's wild landscapes, yet little is known about ectomycorrhizal (EM) fungi in these ecosystems. We examined the EM community associated with Quercus douglasii using sporocarp surveys and by pooling EM roots and subjecting them to DNA extraction, polymerase chain reaction (PCR), cloning, restriction fragment length polymorphism (RFLP) screening and DNA sequencing. Ectomycorrhizal root symbionts were sampled four times in 2003-04. During this time, the below-ground community structure was relatively stable; we found no evidence of taxa adapted to winter or spring conditions and only one species varied widely in occurrence between years. The EM community from sporocarps and roots was diverse (161 species), rich in Ascomycota (46 species), and dominated by fungi with cryptic sporocarps. This included a large number of resupinate and hypogeous taxa, many of which were detected both above- and below-ground.

摘要

栎树林是加利福尼亚野生景观的关键组成部分,但对于这些生态系统中的外生菌根(EM)真菌却知之甚少。我们通过子实体调查以及收集EM根并对其进行DNA提取、聚合酶链反应(PCR)、克隆、限制性片段长度多态性(RFLP)筛选和DNA测序,研究了与蓝橡树相关的EM群落。2003年至2004年对外生菌根根共生体进行了四次采样。在此期间,地下群落结构相对稳定;我们没有发现适应冬季或春季条件的分类群的证据,并且只有一个物种在不同年份间的出现频率差异很大。来自子实体和根的EM群落具有多样性(161种),子囊菌丰富(46种),并且以具有隐蔽子实体的真菌为主。这包括大量的平伏型和地下型分类群,其中许多在地上和地下均被检测到。

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