Tailored glycoproteomics and glycan site mapping using saccharide-selective bioorthogonal probes.
作者信息
Hanson Sarah R, Hsu Tsui-Ling, Weerapana Eranthie, Kishikawa Kuniyuki, Simon Gabriel M, Cravatt Benjamin F, Wong Chi-Huey
机构信息
Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA.
出版信息
J Am Chem Soc. 2007 Jun 13;129(23):7266-7. doi: 10.1021/ja0724083. Epub 2007 May 17.
Abstract
摘要
相似文献
1
Tailored glycoproteomics and glycan site mapping using saccharide-selective bioorthogonal probes.使用糖类选择性生物正交探针进行定制化糖蛋白质组学和聚糖位点图谱分析。
J Am Chem Soc. 2007 Jun 13;129(23):7266-7. doi: 10.1021/ja0724083. Epub 2007 May 17.
2
Imidazolium-tagged glycan probes for non-covalent labeling of live cells.
Chem Commun (Camb). 2016 Apr 7;52(27):4906-9. doi: 10.1039/c5cc10040b. Epub 2016 Mar 14.
3
Selective bioorthogonal probe for N-glycan hybrid structures.用于 N-聚糖杂合结构的选择性生物正交探针。
Nat Chem Biol. 2025 May;21(5):681-692. doi: 10.1038/s41589-024-01756-5. Epub 2024 Oct 28.
4
Tools for Studying Glycans: Recent Advances in Chemoenzymatic Glycan Labeling.聚糖研究工具：化学酶法聚糖标记的最新进展
ACS Chem Biol. 2017 Mar 17;12(3):611-621. doi: 10.1021/acschembio.6b01089. Epub 2017 Feb 13.
5
Chemical reporters to study mammalian O-glycosylation.用于研究哺乳动物 O-糖基化的化学报告试剂。
Biochem Soc Trans. 2021 Apr 30;49(2):903-913. doi: 10.1042/BST20200839.
6
Liposome-Assisted Metabolic Glycan Labeling With Cell and Tissue Selectivity.具有细胞和组织选择性的脂质体辅助代谢聚糖标记
Methods Enzymol. 2018;598:321-353. doi: 10.1016/bs.mie.2017.06.037. Epub 2017 Oct 31.
7
Site-specific glycoproteomics confirms that protein structure dictates formation of N-glycan type, core fucosylation and branching.基于位点的糖蛋白质组学证实，蛋白质结构决定了 N-糖型、核心岩藻糖基化和分支的形成。
Glycobiology. 2012 Nov;22(11):1440-52. doi: 10.1093/glycob/cws110. Epub 2012 Jul 13.
8
Site- and structure-specific quantitative N-glycoproteomics study of differential N-glycosylation in MCF-7 cancer cells.MCF-7 癌细胞中差异 N-糖基化的位点和结构特异性定量 N-糖蛋白质组学研究。
J Proteomics. 2020 Feb 10;212:103594. doi: 10.1016/j.jprot.2019.103594. Epub 2019 Nov 20.
9
N-Glycan Insertion for Probing Protein-Protein Interactions and Epitope Mapping.N-聚糖插入用于探测蛋白质-蛋白质相互作用和表位作图。
Methods Mol Biol. 2024;2747:41-53. doi: 10.1007/978-1-0716-3589-6_4.
10
A glycan FRET assay for detection and characterization of catalytic antibodies to the capsule.聚糖荧光共振能转移测定法用于检测和鉴定针对荚膜的催化抗体
Proc Natl Acad Sci U S A. 2021 Feb 2;118(5). doi: 10.1073/pnas.2016198118.
引用本文的文献
1
Bioorthogonal Chemical Labeling Probes Targeting Sialic Acid Isomers for -Glycan MALDI Imaging Mass Spectrometry of Tissues, Cells, and Biofluids.用于组织、细胞和生物流体中 - 聚糖 MALDI 成像质谱的靶向唾液酸异构体的生物正交化学标记探针。
Anal Chem. 2023 May 16;95(19):7475-7486. doi: 10.1021/acs.analchem.2c04882. Epub 2023 May 1.
2
Reengineering of cancer cell surface charges can modulate cell migration.癌细胞表面电荷的重构可以调节细胞迁移。
Chem Commun (Camb). 2022 May 3;58(36):5522-5525. doi: 10.1039/d2cc00402j.
3
Generating orthogonal glycosyltransferase and nucleotide sugar pairs as next-generation glycobiology tools.生成正交糖基转移酶和核苷酸糖对作为下一代糖生物学工具。
Curr Opin Chem Biol. 2021 Feb;60:66-78. doi: 10.1016/j.cbpa.2020.09.001. Epub 2020 Oct 27.
4
Mass Spectrometric Method for the Unambiguous Profiling of Cellular Dynamic Glycosylation.用于细胞动态糖基化明确分析的质谱分析方法。
ACS Chem Biol. 2020 Oct 16;15(10):2692-2701. doi: 10.1021/acschembio.0c00453. Epub 2020 Sep 4.
5
-GlycositeAtlas: a database resource for mass spectrometry-based human N-linked glycoprotein and glycosylation site mapping.-糖基位点图谱数据库：一个基于质谱的人类N-连接糖蛋白和糖基化位点图谱绘制的数据库资源。
Clin Proteomics. 2019 Sep 7;16:35. doi: 10.1186/s12014-019-9254-0. eCollection 2019.
6
Global and site-specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry.利用质谱技术对复杂生物系统中的蛋白质糖基化进行全局和特定部位分析。
Mass Spectrom Rev. 2019 Aug;38(4-5):356-379. doi: 10.1002/mas.21586. Epub 2019 Jan 3.
7
Applying DNA rolling circle amplification in fluorescence imaging of cell surface glycans labeled by a metabolic method.将DNA滚环扩增应用于通过代谢方法标记的细胞表面聚糖的荧光成像。
Chem Sci. 2016 Sep 1;7(9):6182-6189. doi: 10.1039/c6sc02089e. Epub 2016 Jun 14.
8
Mass Spectrometry Approaches to Glycomic and Glycoproteomic Analyses.糖组学和糖蛋白质组学分析的质谱方法。
Chem Rev. 2018 Sep 12;118(17):7886-7930. doi: 10.1021/acs.chemrev.7b00732. Epub 2018 Mar 19.
9
Bioorthogonal Labeling of Human Prostate Cancer Tissue Slice Cultures for Glycoproteomics.用于糖蛋白质组学的人前列腺癌组织切片培养物的生物正交标记。
Angew Chem Int Ed Engl. 2017 Jul 24;56(31):8992-8997. doi: 10.1002/anie.201701424. Epub 2017 Jun 26.
10
Chemical Glycoproteomics.化学糖蛋白质组学
Chem Rev. 2016 Dec 14;116(23):14277-14306. doi: 10.1021/acs.chemrev.6b00023. Epub 2016 Nov 18.
本文引用的文献
1
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.一种将肽的串联质谱数据与蛋白质数据库中氨基酸序列相关联的方法。
J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89. doi: 10.1016/1044-0305(94)80016-2.
2
Alkynyl sugar analogs for the labeling and visualization of glycoconjugates in cells.用于细胞中糖缀合物标记和可视化的炔基糖类似物。
Proc Natl Acad Sci U S A. 2007 Feb 20;104(8):2614-9. doi: 10.1073/pnas.0611307104. Epub 2007 Feb 12.
3
Chemical methods for glycoprotein discovery.用于糖蛋白发现的化学方法。
Curr Opin Chem Biol. 2007 Feb;11(1):52-8. doi: 10.1016/j.cbpa.2006.11.032. Epub 2006 Dec 14.
4
Metabolic labeling of glycans with azido sugars for visualization and glycoproteomics.用叠氮糖对聚糖进行代谢标记以用于可视化和糖蛋白质组学研究。
Methods Enzymol. 2006;415:230-50. doi: 10.1016/S0076-6879(06)15015-6.
5
Strategies for the preparation of homogenous glycoproteins.制备均一糖蛋白的策略。
Curr Opin Chem Biol. 2006 Dec;10(6):638-44. doi: 10.1016/j.cbpa.2006.10.003. Epub 2006 Oct 13.
6
Chemical technologies for probing glycans.用于探测聚糖的化学技术。
Cell. 2006 Sep 8;126(5):851-4. doi: 10.1016/j.cell.2006.08.017.
7
The use of mass spectrometry for the proteomic analysis of glycosylation.质谱法在糖基化蛋白质组分析中的应用。
Proteomics. 2006 Jul;6(14):3993-4015. doi: 10.1002/pmic.200600129.
8
Identification of N-linked glycoproteins in human saliva by glycoprotein capture and mass spectrometry.通过糖蛋白捕获和质谱法鉴定人唾液中的N-连接糖蛋白。
J Proteome Res. 2006 Jun;5(6):1493-503. doi: 10.1021/pr050492k.
9
Proteomic analysis of serum associated fucosylated glycoproteins in the development of primary hepatocellular carcinoma.原发性肝细胞癌发生过程中血清相关岩藻糖基化糖蛋白的蛋白质组学分析
J Proteome Res. 2006 Feb;5(2):308-15. doi: 10.1021/pr050328x.
10
O-linked N-acetylglucosamine proteomics of postsynaptic density preparations using lectin weak affinity chromatography and mass spectrometry.使用凝集素弱亲和色谱法和质谱法对突触后致密体制剂进行O-连接的N-乙酰葡糖胺蛋白质组学研究。
Mol Cell Proteomics. 2006 May;5(5):923-34. doi: 10.1074/mcp.T500040-MCP200. Epub 2006 Feb 1.
Zotero 插件