Banerjee Srijita, Mirsamadi Neda, Anantharaman Lavanya, Sivaram Mylavarapu V S, Gupta Rasik B, Choudhury Devapriya, Roy Rajendra P
National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, 110 067, India.
Protein J. 2007 Oct;26(7):445-55. doi: 10.1007/s10930-007-9084-1.
The identity of intermolecular contact residues in sickle hemoglobin (HbS) fiber is largely known. However, our knowledge about combinatorial effects of two or more contact sites or the mechanistic basis of such effects is rather limited. Lys16, His20, and Glu23 of the alpha-chain occur in intra-double strand axial contacts in the sickle hemoglobin (HbS) fiber. Here we have constructed two novel double mutants, HbS (K16Q/E23Q) and (H20Q/E23Q), with a view to delineate cumulative impact of interactions emanating from the above contact sites. Far-UV and visible region CD spectra of the double mutants were similar to the native HbS indicating the presence of native-like secondary and tertiary structure in the mutants. The quaternary structures in both the mutants were also preserved as judged by the derivative UV spectra of liganded (oxy) and unliganded (deoxy) forms of the double mutants. However, the double mutants displayed interesting polymerization behavior. The polymerization behaviour of the double mutants was found to be non-additive of the individual single mutants. While HbS (H20Q/E23Q) showed inhibitory effect similar to that of HbS (E23Q), the intrinsic inhibitory propensity of the associated single mutants was totally quelled in HbS (K16Q/E23Q) double mutant. Molecular dynamics (MD) simulations studies of the isolated alpha-chains as well as a module of the fiber containing the double and associated single mutants suggested that these contact sites at the axial interface of the fiber impact HbS polymerization through a coupled interaction network. The overall results demonstrate a subtle role of dynamics and electrostatics in the polymer formation and provide insights about interaction-linkage in HbS fiber assembly.
镰状血红蛋白(HbS)纤维中分子间接触残基的身份在很大程度上已为人所知。然而,我们对两个或更多接触位点的组合效应或此类效应的机制基础的了解相当有限。α链的Lys16、His20和Glu23出现在镰状血红蛋白(HbS)纤维的双股内轴向接触中。在此,我们构建了两个新型双突变体,HbS(K16Q/E23Q)和(H20Q/E23Q),以描绘上述接触位点产生的相互作用的累积影响。双突变体的远紫外和可见区域圆二色光谱与天然HbS相似,表明突变体中存在类似天然的二级和三级结构。通过双突变体的配体结合(氧合)和未结合(脱氧)形式的导数紫外光谱判断,两个突变体的四级结构也得以保留。然而,双突变体表现出有趣的聚合行为。发现双突变体的聚合行为并非单个单突变体的简单加和。虽然HbS(H20Q/E23Q)表现出与HbS(E23Q)相似的抑制作用,但相关单突变体的内在抑制倾向在HbS(K16Q/E23Q)双突变体中完全被消除。对分离的α链以及包含双突变体和相关单突变体的纤维模块进行的分子动力学(MD)模拟研究表明,纤维轴向界面处的这些接触位点通过耦合相互作用网络影响HbS聚合。总体结果证明了动力学和静电在聚合物形成中的微妙作用,并提供了关于HbS纤维组装中相互作用联系的见解。