Yamniuk Aaron P, Silver Dylan M, Anderson Kathryn L, Martin Stephen R, Vogel Hans J
Structural Biology Research Group, Department of Biological Sciences, University of Calgary, 2500 University Drive N.W., Calgary, AB, Canada, T2N 1N4.
Biochemistry. 2007 Jun 19;46(24):7088-98. doi: 10.1021/bi700200z. Epub 2007 May 22.
It is widely accepted that a pair of EF-hands is the functional unit of typical four EF-hand proteins such as calmodulin or troponin C. In this work we investigate the structure and stability of the four EF-hand domains in the related protein calcium- and integrin-binding protein 1 (CIB1) in the presence and absence of Mg2+ or Ca2+, to determine if similar EF-hand interactions occur. The backbone structure and flexibility of CIB1 were first studied by NMR spectroscopy, and these studies were complimented with steady-state fluorescence spectroscopy and chemical denaturation experiments using mutant CIB1 proteins having single Trp reporter groups in each of the four EF-hand domains EF-I (F34W), EF-II (F91W), EF-III (L128W), and EF-IV (F173W). We find that Mg2+-CIB1 adopts a well-folded structure similar to Ca2+-CIB1, except for some conformational heterogeneity in the C-terminal EF-IV domain. The structure of apo-CIB1 is significantly more dynamic, especially within EF-II, EF-III, and a partially unfolded EF-IV region, but the N-terminal EF-I region of apo-CIB1 has a well-ordered and more stable structure. The data reveal significant communication between the N- and C-lobes of CIB1, and show that transient intermediate conformations are formed along the unfolding pathway for each form of the protein. Collectively the data demonstrate that the communication between the paired EF-hand domains as well as between the N- and C-lobes of CIB1 is distinct from the ancestral proteins calmodulin and troponin C, which might be important for the unique function of CIB1 in numerous biological processes.
人们普遍认为,一对EF手结构是典型的四EF手蛋白(如钙调蛋白或肌钙蛋白C)的功能单元。在这项工作中,我们研究了相关蛋白钙和整合素结合蛋白1(CIB1)中四个EF手结构域在存在和不存在Mg2+或Ca2+的情况下的结构和稳定性,以确定是否发生类似的EF手相互作用。首先通过核磁共振光谱研究了CIB1的主链结构和灵活性,并且使用在四个EF手结构域EF-I(F34W)、EF-II(F91W)、EF-III(L128W)和EF-IV(F173W)中每个都具有单个色氨酸报告基团的突变CIB1蛋白,通过稳态荧光光谱和化学变性实验对这些研究进行了补充。我们发现,Mg2+-CIB1采用与Ca2+-CIB1相似的折叠良好的结构,除了C端EF-IV结构域存在一些构象异质性。无辅基CIB1的结构明显更具动态性,尤其是在EF-II、EF-III和部分未折叠的EF-IV区域内,但无辅基CIB1的N端EF-I区域具有有序且更稳定的结构。数据揭示了CIB1的N叶和C叶之间存在显著的通信,并表明在蛋白质的每种形式的展开途径中形成了瞬时中间构象。总体而言,数据表明CIB1的成对EF手结构域之间以及N叶和C叶之间的通信不同于祖先蛋白钙调蛋白和肌钙蛋白C,这可能对CIB1在众多生物过程中的独特功能很重要。