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一氧化碳肌红蛋白中配体光解离后的初级蛋白质反应。

Primary protein response after ligand photodissociation in carbonmonoxy myoglobin.

作者信息

Sato Akira, Gao Ying, Kitagawa Teizo, Mizutani Yasuhisa

机构信息

Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, Honmachi, Kawaguchi 332-0012, Japan.

出版信息

Proc Natl Acad Sci U S A. 2007 Jun 5;104(23):9627-32. doi: 10.1073/pnas.0611560104. Epub 2007 May 21.

Abstract

Time-resolved UV resonance Raman (UVRR) spectroscopic studies of WT and mutant myoglobin were performed to reveal the dynamics of protein motion after ligand dissociation. After dissociation of carbon monoxide (CO) from the heme, UVRR bands of Tyr showed a decrease in intensity with a time constant of 2 ps. The intensity decrease was followed by intensity recovery with a time constant of 8 ps. On the other hand, UVRR bands of Trp residues located in the A helix showed an intensity decrease that was completed within the instrument response time. The intensity decrease was followed by an intensity recovery with a time constant of approximately 50 ps and lasted up to 1 ns. The time-resolved UVRR study of the myoglobin mutants demonstrated that the hydrophobicity of environments around Trp-14 decreased, whereas that around Trp-7 barely changed in the primary protein response. The present data indicate that displacement of the E helix toward the heme occurs within the instrument response time and that movement of the FG corner takes place with a time constant of 2 ps. The finding that the instantaneous motion of the E helix strongly suggests a mechanism in which protein structural changes are propagated from the heme to the A helix through the E helix motion.

摘要

为揭示配体解离后蛋白质运动的动力学,对野生型和突变型肌红蛋白进行了时间分辨紫外共振拉曼(UVRR)光谱研究。一氧化碳(CO)从血红素上解离后,酪氨酸的UVRR谱带强度以2皮秒的时间常数下降。强度下降之后是强度恢复,时间常数为8皮秒。另一方面,位于A螺旋中的色氨酸残基的UVRR谱带强度下降在仪器响应时间内完成。强度下降之后是强度恢复,时间常数约为50皮秒,持续长达1纳秒。对肌红蛋白突变体的时间分辨UVRR研究表明,在蛋白质的初始响应中,色氨酸-14周围环境的疏水性降低,而色氨酸-7周围环境的疏水性几乎没有变化。目前的数据表明,E螺旋向血红素的位移在仪器响应时间内发生,FG转角的移动时间常数为2皮秒。E螺旋的瞬时运动这一发现强烈暗示了一种机制,即蛋白质结构变化通过E螺旋运动从血红素传播到A螺旋。

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Time-dependent atomic coordinates for the dissociation of carbon monoxide from myoglobin.肌红蛋白中一氧化碳解离的时间相关原子坐标。
Acta Crystallogr D Biol Crystallogr. 2006 Jul;62(Pt 7):776-83. doi: 10.1107/S0907444906017318. Epub 2006 Jun 20.
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Mechanisms of ligand discrimination by heme proteins.血红素蛋白对配体的识别机制。
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