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标记文库方法有助于正向化学遗传学。

Tagged library approach facilitates forward chemical genetics.

作者信息

Kim Yun Kyung, Chang Young-Tae

机构信息

Department of Chemistry, New York University, New York, NY 10003, USA.

出版信息

Mol Biosyst. 2007 Jun;3(6):392-7. doi: 10.1039/b702321a. Epub 2007 Apr 20.

Abstract

Forward chemical genetics has been highlighted as a new method for the study of various biological pathways using exogenous ligands. However, limited success in the field has demonstrated that, in many cases, it is not feasible to determine the protein targets of small-molecule probes. Identifying protein targets is an integral part of forward chemical genetics and is also the most challenging. Over the past decade, several biochemical and genetic methods have been developed to facilitate target identification processes. Even so, one of the major difficulties is that these methods require the chemical modification of active compounds, with a significant amount of structure-activity relationship (SAR) study to ensure that the small-molecule tags do not compromise bioactivity. In this article, we will highlight a new strategy for small molecule libraries that have built-in linkers in order to avoid this well-known problem and demonstrate their successful use in forward chemical genetics.

摘要

正向化学遗传学已成为利用外源性配体研究各种生物途径的一种新方法。然而,该领域有限的成功表明,在许多情况下,确定小分子探针的蛋白质靶点是不可行的。识别蛋白质靶点是正向化学遗传学不可或缺的一部分,也是最具挑战性的部分。在过去十年中,已经开发了几种生化和遗传方法来促进靶点识别过程。即便如此,主要困难之一在于这些方法需要对活性化合物进行化学修饰,并进行大量的构效关系(SAR)研究,以确保小分子标签不会损害生物活性。在本文中,我们将重点介绍一种针对具有内置连接子的小分子文库的新策略,以避免这一众所周知的问题,并展示其在正向化学遗传学中的成功应用。

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