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SoxXA的异常氧化还原中心,一种对泛养副球菌化学营养型硫氧化至关重要的新型c型血红素酶。

The unusal redox centers of SoxXA, a novel c-type heme-enzyme essential for chemotrophic sulfur-oxidation of Paracoccus pantotrophus.

作者信息

Reijerse Edward J, Sommerhalter Monika, Hellwig Petra, Quentmeier Armin, Rother Dagmar, Laurich Christoph, Bothe Eberhard, Lubitz Wolfgang, Friedrich Cornelius G

机构信息

Max-Planck-Institut für Bioanorganische Chemie, Stiftstrasse 34-36, D-45470 Mülheim/Ruhr, Germany.

出版信息

Biochemistry. 2007 Jul 3;46(26):7804-10. doi: 10.1021/bi7003526. Epub 2007 Jun 5.

DOI:10.1021/bi7003526
PMID:17547421
Abstract

The heterodimeric hemoprotein SoxXA, essential for lithotrophic sulfur oxidation of the aerobic bacterium Paracoccus pantotrophus, was examined by a combination of spectroelectrochemistry and EPR spectroscopy. The EPR spectra for SoxXA showed contributions from three paramagnetic heme iron centers. One highly anisotropic low-spin (HALS) species (gmax = 3.45) and two "standard" cytochrome-like low-spin heme species with closely spaced g-tensor values were identified, LS1 (gz = 2.54, gy = 2.30, and gx = 1.87) and LS2 (gz = 2.43, gy = 2.26, and gx = 1.90). The crystal structure of SoxXA from P. pantotrophus confirmed the presence of three heme groups, one of which (heme 3) has a His/Met axial coordination and is located on the SoxX subunit [Dambe et al. (2005) J. Struct. Biol. 152, 229-234]. This heme was assigned to the HALS species in the EPR spectra of the isolated SoxX subunit. The LS1 and LS2 species were associated with heme 1 and heme 2 located on the SoxA subunit, both of which have EPR parameters characteristic for an axial His/thiolate coordination. Using thin-layer spectroelectrochemistry the midpoint potentials of heme 3 and heme 2 were determined: Em3 = +189 +/- 15 mV and Em2 = -432 +/- 15 mV (vs NHE, pH 7.0). Heme 1 was not reducible even with 20 mM titanium(III) citrate. The Em2 midpoint potential turned out to be pH dependent. It is proposed that heme 2 participates in the catalysis and that the cysteine persulfide ligation leads to the unusually low redox potential (-436 mV). The pH dependence of its redox potential may be due to (de)protonation of the Arg247 residue located in the active site.

摘要

通过光谱电化学和电子顺磁共振(EPR)光谱相结合的方法,对嗜氧细菌嗜糖假单胞菌的化能无机硫氧化所必需的异二聚体血红素蛋白SoxXA进行了研究。SoxXA的EPR光谱显示来自三个顺磁性血红素铁中心的贡献。鉴定出一种高度各向异性的低自旋(HALS)物种(gmax = 3.45)和两种具有紧密间隔的g张量值的“标准”细胞色素样低自旋血红素物种,LS1(gz = 2.54,gy = 2.30,gx = 1.87)和LS2(gz = 2.43,gy = 2.26,gx = 1.90)。嗜糖假单胞菌SoxXA的晶体结构证实存在三个血红素基团,其中一个(血红素3)具有His/Met轴向配位,位于SoxX亚基上[Dambe等人(2005年)《结构生物学杂志》152,229 - 234]。该血红素在分离的SoxX亚基的EPR光谱中被指定为HALS物种。LS1和LS2物种与位于SoxA亚基上的血红素1和血红素2相关,这两者都具有轴向His/硫醇盐配位特征的EPR参数。使用薄层光谱电化学测定了血红素3和血红素2的中点电位:Em3 = +189 +/- 15 mV和Em2 = -432 +/- 15 mV(相对于NHE,pH 7.0)。即使使用20 mM柠檬酸钛(III),血红素1也不可还原。结果表明Em2中点电位依赖于pH。有人提出血红素2参与催化作用,并且半胱氨酸过硫化物连接导致异常低的氧化还原电位(-436 mV)。其氧化还原电位的pH依赖性可能是由于位于活性位点的Arg247残基的(去)质子化。

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