Hua Ngoc-Phuc, Kanekiyo Atsuko, Fujikura Katsunori, Yasuda Hisato, Naganuma Takeshi
Graduate School of Biosphere Science, Hiroshima University, Kagamiyama, Higashi-Hiroshima 739-8528, Japan.
Japan Agency for Marine-Earth Science and Technology, Natsushima-cho, Yokosuka 237-0061, Japan.
Int J Syst Evol Microbiol. 2007 Jun;57(Pt 6):1243-1249. doi: 10.1099/ijs.0.64817-0.
Two Gram-positive, rod-shaped, moderately halophilic bacteria were isolated from a deep-sea carbonate rock at a methane cold seep in Kuroshima Knoll, Japan. These bacteria, strains IS-Hb4(T) and IS-Hb7(T), were spore-forming and non-motile. They were able to grow at temperatures as low as 9 degrees C and hydrostatic pressures up to 30 MPa. Based on high sequence similarity of their 16S rRNA genes to those of type strains of the genus Halobacillus, from 96.4 % (strain IS-Hb7(T) to Halobacillus halophilus NCIMB 9251(T)) to 99.4 % (strain IS-Hb4(T) to Halobacillus dabanensis D-8(T)), the strains were shown to belong to this genus. DNA-DNA relatedness values of 49.5 % and 1.0-33.0 %, respectively, were determined between strains IS-Hb4(T) and IS-Hb7(T) and between these strains and other Halobacillus type strains. Both strains showed the major menaquinone MK7 and L-orn-D-Asp cell-wall peptidoglycan type. Straight-chain C(16 : 0), unsaturated C(16 : 1)omega7c alcohol and C(18 : 1)omega7c and cyclopropane C(19 : 0) cyc fatty acids were predominant in both strains. The DNA G+C contents of IS-Hb4(T) and IS-Hb7(T) were respectively 43.3 and 42.1 mol%. Physiological and biochemical analyses combined with DNA-DNA hybridization results allowed us to place strains IS-Hb4(T) (=JCM 14154(T)=DSM 18394(T)) and IS-Hb7(T) (=JCM 14155(T)=DSM 18393(T)) in the genus Halobacillus as the respective type strains of the novel species Halobacillus profundi sp. nov. and Halobacillus kuroshimensis sp. nov.
从日本黑岛海丘甲烷冷泉的深海碳酸盐岩中分离出两株革兰氏阳性、杆状、中度嗜盐细菌。这两株细菌,即IS-Hb4(T)和IS-Hb7(T)菌株,可形成芽孢且无运动性。它们能够在低至9℃的温度和高达30 MPa的静水压力下生长。基于其16S rRNA基因与嗜盐芽孢杆菌属模式菌株的基因序列高度相似,相似度从96.4%(IS-Hb7(T)菌株与嗜盐嗜盐芽孢杆菌NCIMB 9251(T))到99.4%(IS-Hb4(T)菌株与达坂嗜盐芽孢杆菌D-8(T)),表明这些菌株属于该属。IS-Hb4(T)和IS-Hb7(T)菌株之间以及这些菌株与其他嗜盐芽孢杆菌模式菌株之间的DNA-DNA相关性值分别为49.5%和1.0 - 33.0%。两株菌株均显示主要的甲基萘醌为MK7,细胞壁肽聚糖类型为L-orn-D-Asp。直链C(16 : 0)、不饱和C(16 : 1)ω7c醇以及C(18 : 1)ω7c和环丙烷C(19 : 0) cyc脂肪酸在两株菌株中均占主导地位。IS-Hb4(T)和IS-Hb7(T)的DNA G+C含量分别为43.3和42.1 mol%。生理生化分析结合DNA-DNA杂交结果使我们能够将IS-Hb4(T)(=JCM 14154(T)=DSM 18394(T))和IS-Hb7(T)(=JCM 14155(T)=DSM 18393(T))菌株归入嗜盐芽孢杆菌属,分别作为新物种深海嗜盐芽孢杆菌(Halobacillus profundi sp. nov.)和黑岛嗜盐芽孢杆菌(Halobacillus kuroshimensis sp. nov.)的模式菌株。