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台湾类芽孢杆菌新种,从台湾土壤中分离得到。

Paenibacillus taiwanensis sp. nov., isolated from soil in Taiwan.

作者信息

Lee Fwu-Ling, Kuo Hsiao-Ping, Tai Chun-Ju, Yokota Akira, Lo Chi-Chu

机构信息

Bioresource Collection and Research Center, Food Industry Research and Development Institute, PO Box 246, Hsinchu 30099, Taiwan.

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-Ku, Tokyo 113-0032, Japan.

出版信息

Int J Syst Evol Microbiol. 2007 Jun;57(Pt 6):1351-1354. doi: 10.1099/ijs.0.64764-0.

Abstract

Among a large collection of Taiwanese soil isolates, a novel Gram-variable, rod-shaped, motile and endospore-forming bacterial strain, designated G-soil-2-3(T), was isolated from farmland soil in Wu-Feng, Taiwan. The isolate was subjected to a polyphasic study including 16S rRNA gene sequence analysis, DNA-DNA hybridization experiments, fatty acid analysis and comparative phenotypic characterization. 16S rRNA gene sequence analysis indicated that the organism belongs within the genus Paenibacillus. It contained menaquinone MK-7 as the predominant isoprenoid quinone and anteiso-C(15 : 0) (40.5 %), iso-C(15 : 0) (13.1 %), iso-C(16 : 0) (10.8 %) and anteiso-C(17 : 0) (7.3 %) as the major fatty acids. Phylogenetically, the closest relatives of strain G-soil-2-3(T) were the type strains of Paenibacillus assamensis, Paenibacillus alvei and Paenibacillus apiarius, with 16S rRNA gene sequence similarity of 95.7, 95 and 95.2 %, respectively. DNA-DNA hybridization experiments showed levels of relatedness of 2.8-9.0 % of strain G-soil-2-3(T) with these strains. The G+C content of the DNA was 44.6 mol%. Strain G-soil-2-3(T) was clearly distinguishable from P. assamensis, P. alvei and P. apiarius and thus represents a novel species of the genus Paenibacillus, for which the name Paenibacillus taiwanensis sp. nov. is proposed. The type strain is G-soil-2-3(T) (=BCRC 17411(T)=IAM 15414(T)=LMG 23799(T)=DSM 18679(T)).

摘要

在一大批台湾土壤分离株中,从台湾雾峰的农田土壤中分离出一株新型革兰氏可变、杆状、具运动性且形成芽孢的细菌菌株,命名为G-soil-2-3(T)。对该分离株进行了多相研究,包括16S rRNA基因序列分析、DNA-DNA杂交实验、脂肪酸分析和比较表型特征分析。16S rRNA基因序列分析表明,该菌株属于芽孢杆菌属。它以甲基萘醌MK-7作为主要的类异戊二烯醌,主要脂肪酸为anteiso-C(15 : 0)(40.5%)、iso-C(15 : 0)(13.1%)、iso-C(16 : 0)(10.8%)和anteiso-C(17 : 0)(7.3%)。在系统发育上,菌株G-soil-2-3(T)最接近的亲缘种是阿萨姆芽孢杆菌、蜂房芽孢杆菌和蜂芽孢杆菌的模式菌株,16S rRNA基因序列相似性分别为95.7%、95%和95.2%。DNA-DNA杂交实验表明,菌株G-soil-2-3(T)与这些菌株的亲缘关系水平为2.8 - 9.0%。该菌株DNA的G+C含量为44.6 mol%。菌株G-soil-2-3(T)明显区别于阿萨姆芽孢杆菌、蜂房芽孢杆菌和蜂芽孢杆菌,因此代表芽孢杆菌属的一个新种,为此提出新名称台湾芽孢杆菌(Paenibacillus taiwanensis sp. nov.)。模式菌株为G-soil-2-3(T)(=BCRC 17411(T)=IAM 154

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