Department of Life and Nanopharmaceutical Sciences and Department of Biology, Kyung Hee University, Seoul 130-701, Republic of Korea.
J Microbiol. 2013 Jun;51(3):312-7. doi: 10.1007/s12275-013-3198-2. Epub 2013 Jun 28.
A Gram-negative, nonmotile, endospore-forming, rod-shaped bacterial strain LHW35(T), which belonged to the genus Paenibacillus, was isolated from marine sediment collected from the south coast of the Republic of Korea. A phylogenetic analysis of 16S rRNA gene sequences indicated that strain LHW35(T) was most closely related to Paenibacillus taiwanensis G-soil-2-3(T) (97.2% similarity). The optimal growth conditions for strain LHW35(T) were 37°C, pH 6.0, and 0% (w/v) NaCl. The main isoprenoid quinone was menaquinone-7 (MK-7) and the major polyamine was spermidine. The diamino acid present in the cell-wall peptidoglycan was meso-diaminopimelic acid. The major fatty acids were anteiso-C15:0 and C16:0. The polar lipids were phosphatidylethanolamine, phosphatidylglycerol, unidentified amino-hospholipids, unidentified phospholipids, and unidentified polar lipids. A DNA-DNA hybridization experiment using the type strain of P. taiwanensis indicated <40% relatedness. The DNA G+C content was 45.0 mol%. Based on these phylogenetic, genomic, and phenotypic analyses, strain LHW35(T) should be classified as a novel species within the genus Paenibacillus, for which the name Paenibacillus marinisediminis sp. nov. is proposed. The type strain is LHW35(T) (=KACC 16317(T) =JCM 17886(T)).
一株革兰氏阴性、非运动性、产芽孢的杆状细菌 LHW35(T),属于类芽孢杆菌属,从韩国南部海岸的海洋沉积物中分离得到。16S rRNA 基因序列的系统发育分析表明,菌株 LHW35(T)与 Paenibacillus taiwanensis G-soil-2-3(T)(97.2%相似性)最为密切相关。菌株 LHW35(T)的最佳生长条件为 37°C、pH6.0 和 0%(w/v)NaCl。主要的异戊烯醌是menaquinone-7 (MK-7),主要的多胺是亚精胺。细胞壁肽聚糖中的二氨基酸是 meso-二氨基庚二酸。主要脂肪酸为anteiso-C15:0 和 C16:0。极性脂为磷脂酰乙醇胺、磷脂酰甘油、未鉴定的氨基酸磷脂、未鉴定的磷脂和未鉴定的极性脂。使用 P. taiwanensis 的模式株进行的 DNA-DNA 杂交实验表明,两者的相关性<40%。DNA G+C 含量为 45.0 mol%。基于这些系统发育、基因组和表型分析,菌株 LHW35(T)应归类为类芽孢杆菌属中的一个新种,命名为 Paenibacillus marinisediminis sp. nov.。模式株为 LHW35(T)=KACC 16317(T)=JCM 17886(T)。