Schmidt Paul S, Phifer-Rixey Megan, Taylor Graeme M, Christner John
Department of Biology, University of Pennsylvania, 433 S. University Avenue, Philadelphia, PA 19104-6018, USA.
Mol Ecol. 2007 Jun;16(11):2393-404. doi: 10.1111/j.1365-294X.2007.03323.x.
Comparisons among patterns exhibited by functionally distinct genetic markers have been widely used to infer the impacts of demography and selection in structuring genetic variation in natural populations. However, such multilocus comparisons remain an indirect evaluation of selection at particular candidate loci; ideally, the identification of a candidate gene by comparative genetic methodologies should be complemented by functional analyses and experimental manipulations of genotypes in the laboratory or field. We examined genotype frequency variation among replicated intertidal habitats at two spatial scales in the grazing snail Littorina obtusata. Both of the candidate allozyme markers varied predictably with environment, and these patterns were consistent at both spatial scales. Three of four reference loci were spatially homogeneous, but one microsatellite exhibited significant structure at both geographical and mesoscales. To initiate a direct examination of whether the observed genotype frequency variation at one of the candidate markers, mannose-6-phosphate isomerase (MPI), was impacted by differential survivorship of genotypes, we conducted a series of laboratory-based thermal stress assays using snails from two geographically disparate source populations. When snails were exposed to bouts of thermal/desiccation stress, patterns of mortality were nonrandom with respect to MPI genotype. Furthermore, patterns of mortality in the laboratory manipulation coincided with the observed distribution of genotypes in the field. The data suggest the operation of selection at the Mpi or a linked locus, but functional studies and further experimentation are required to establish the relationship between MPI genotype and fitness across heterogeneous intertidal environments.
功能不同的遗传标记所呈现的模式之间的比较已被广泛用于推断种群统计学和选择对自然种群遗传变异结构的影响。然而,这种多位点比较仍然是对特定候选基因座选择的间接评估;理想情况下,通过比较遗传方法鉴定候选基因应辅以实验室或野外的功能分析和基因型实验操作。我们在食草蜗牛钝拟滨螺的两个空间尺度上,研究了潮间带栖息地重复样本中的基因型频率变化。两个候选等位酶标记都随环境呈现出可预测的变化,并且这些模式在两个空间尺度上都是一致的。四个参考基因座中有三个在空间上是均匀的,但一个微卫星在地理尺度和中尺度上都表现出显著的结构。为了直接检验在候选标记之一磷酸甘露糖异构酶(MPI)处观察到的基因型频率变化是否受到基因型差异存活率的影响,我们使用来自两个地理上不同来源种群的蜗牛进行了一系列基于实验室的热应激试验。当蜗牛暴露于热/干燥应激时,死亡率模式相对于MPI基因型是非随机的。此外,实验室操作中的死亡率模式与野外观察到的基因型分布一致。数据表明在Mpi或一个连锁基因座上存在选择作用,但需要功能研究和进一步的实验来确定MPI基因型与异质潮间带环境中适应性之间的关系。