Burmølle Mette, Hansen Lars H, Sørensen Søren J
Department of Microbiology, University of Copenhagen, Copenhagen K, Denmark.
Microb Ecol. 2007 Aug;54(2):352-62. doi: 10.1007/s00248-007-9222-5. Epub 2007 Jun 26.
Most soil bacteria are likely to be organized in biofilms on roots, litter, or soil particles. Studies of such biofilms are complicated by the many nonculturable species present in soil, as well as the interspecific bacterial interactions affecting biofilm biology. We in this study describe the development of a biofilm flow model and use this system to establish an early (days 1-7) flow biofilm of soil bacteria from agricultural soil. It was possible to follow the succession in the early flow biofilm by denaturing gradient gel electrophoresis (DGGE) analysis, and it was demonstrated that the majority of strains present in the biofilm were culturable. We isolated and identified nine strains, all associated with unique DGGE profiles, and related their intrinsic phenotypes regarding monospecies biofilm formation in microtiter plates and planktonic growth characteristics to the appearance of the strains in the flow biofilm. The ability of the strains to attach to and establish biofilm in microtiter plates was reflected in their flow biofilm appearance, whereas no such reflection of the planktonic growth characteristics in the flow biofilm appearance was observed. One strain-specific synergistic interaction, strongly promoting biofilm formation of two strains when cultured together in a dual-species biofilm, was observed, indicating that some strains promote biofilm formation of others. Thus, the biofilm flow model proved useful for investigations of how intrinsic phenotypic traits of individual species affect the succession in an early soil biofilm consortium.
大多数土壤细菌可能以生物膜的形式存在于根、凋落物或土壤颗粒上。由于土壤中存在许多不可培养的物种,以及种间细菌相互作用影响生物膜生物学,对这类生物膜的研究变得复杂。在本研究中,我们描述了一种生物膜流动模型的开发,并使用该系统建立了来自农业土壤的土壤细菌早期(第1 - 7天)流动生物膜。通过变性梯度凝胶电泳(DGGE)分析,可以追踪早期流动生物膜中的演替过程,并且证明生物膜中存在的大多数菌株是可培养的。我们分离并鉴定了9株菌株,它们都与独特的DGGE图谱相关,并将它们在微量滴定板中形成单物种生物膜的内在表型以及浮游生长特征与它们在流动生物膜中的出现情况相关联。菌株在微量滴定板中附着和形成生物膜的能力反映在它们在流动生物膜中的外观上,而在流动生物膜外观中未观察到浮游生长特征的这种反映。观察到一种菌株特异性的协同相互作用,当两种菌株在双物种生物膜中共同培养时,强烈促进它们的生物膜形成,这表明一些菌株促进其他菌株的生物膜形成。因此,生物膜流动模型被证明对于研究单个物种的内在表型特征如何影响早期土壤生物膜群落中的演替是有用的。