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共培养中土壤细菌分离株间生物膜协同作用的高发生率表明细菌种间存在合作。

High prevalence of biofilm synergy among bacterial soil isolates in cocultures indicates bacterial interspecific cooperation.

作者信息

Ren Dawei, Madsen Jonas S, Sørensen Søren J, Burmølle Mette

机构信息

Section of Microbiology, Department of Biology, University of Copenhagen, Copenhagen, Denmark.

出版信息

ISME J. 2015 Jan;9(1):81-9. doi: 10.1038/ismej.2014.96. Epub 2014 Jun 17.

Abstract

Biofilms that form on roots, litter and soil particles typically contain multiple bacterial species. Currently, little is known about multispecies biofilm interactions and few studies have been based on environmental isolates. Here, the prevalence of synergistic effects in biofilm formation among seven different soil isolates, cocultured in combinations of four species, was investigated. We observed greater biofilm biomass production in 63% of the four-species culture combinations tested than in biofilm formed by single-species cultures, demonstrating a high prevalence of synergism in multispecies biofilm formation. One four-species consortium, composed of Stenotrophomonas rhizophila, Xanthomonas retroflexus, Microbacterium oxydans and Paenibacillus amylolyticus, exhibited strong synergy in biofilm formation and was selected for further study. Of the four strains, X. retroflexus was the only one capable of forming abundant biofilm in isolation, under the in vitro conditions investigated. In accordance, strain-specific quantitative PCR revealed that X. retroflexus was predominant within the four-species consortium (>97% of total biofilm cell number). Despite low relative abundance of all the remaining strains, all were indispensable for the strong synergistic effect to occur within the four-species biofilm. Moreover, absolute individual strain cell numbers were significantly enhanced when compared with those of single-species biofilms, indicating that all the individual strains benefit from inclusion in the multispecies community. Our results show a high prevalence of synergy in biofilm formation in multispecies consortia isolated from a natural bacterial habitat and suggest that interspecific cooperation occurs.

摘要

在根系、枯枝落叶和土壤颗粒上形成的生物膜通常包含多种细菌物种。目前,人们对多物种生物膜间的相互作用了解甚少,基于环境分离株开展的研究也为数不多。在此,我们研究了从七种不同土壤分离株中选取四种组合共培养时,生物膜形成中协同效应的普遍性。我们观察到,在所测试的63%的四物种培养组合中,生物膜生物量的产生比单物种培养形成的生物膜更多,这表明在多物种生物膜形成中协同作用普遍存在。一个由嗜根寡养单胞菌、弯曲黄单胞菌、氧化微杆菌和解淀粉芽孢杆菌组成的四物种群落,在生物膜形成中表现出强烈的协同作用,并被选作进一步研究对象。在所研究的体外条件下,四种菌株中,弯曲黄单胞菌是唯一能够单独形成大量生物膜的菌株。相应地,菌株特异性定量PCR显示,弯曲黄单胞菌在四物种群落中占主导地位(>生物膜细胞总数的97%)。尽管所有其余菌株的相对丰度较低,但对于四物种生物膜内强大的协同效应的发生,它们都是不可或缺的。此外,与单物种生物膜相比,各菌株的绝对细胞数显著增加,这表明所有单个菌株都从多物种群落中受益。我们的结果表明,从天然细菌栖息地分离出的多物种群落生物膜形成中协同作用普遍存在,并表明种间合作的发生。

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Interactions in multispecies biofilms: do they actually matter?多物种生物膜中的相互作用:它们真的重要吗?
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