Fernández Ariel, Chen Jianping, Crespo Alejandro
Department of Bioengineering, Rice University, Houston, Texas 77005, USA.
J Chem Phys. 2007 Jun 28;126(24):245103. doi: 10.1063/1.2745795.
The hydration shell of a soluble folded protein is not uniform: its tightness, marked by the mobility of interfacial water, is site dependent and modulates the propensity for protein associations. We found that the most pronounced interfacial dehydration propensity for representative folds is promoted by solvent-exposed intramolecular hydrogen bonds that are incompletely shielded from water attack. These bonds are poorly wrapped by surrounding nonpolar groups from the side chains and their dehydration is energetically favored.
其紧密程度(以界面水的流动性为标志)具有位点依赖性,并调节蛋白质缔合的倾向。我们发现,对于代表性折叠而言,最显著的界面脱水倾向是由暴露于溶剂中的分子内氢键所促进的,这些氢键并未完全免受水的攻击。这些氢键从侧面被周围侧链的非极性基团包裹得很差,并且它们的脱水在能量上是有利的。