Korennykh Alexei V, Correll Carl C, Piccirilli Joseph A
RNA. 2007 Sep;13(9):1391-6. doi: 10.1261/rna.619707. Epub 2007 Jul 12.
Alpha-sarcin and ricin represent two structurally and mechanistically distinct families of site-specific enzymes that block translation by irreversibly modifying the sarcin/ricin loop (SRL) of 23S-28S rRNA. alpha-Sarcin family enzymes are designated as ribotoxins and act as endonucleases. Ricin family enzymes are designated as ribosome inactivating proteins (RIP) and act as N-glycosidases. Recently, we demonstrated that basic surface residues of the ribotoxin restrictocin promote rapid and specific ribosome targeting by this endonuclease. Here, we report that three RIP: ricin A, saporin, and gypsophilin depurinate the ribosome with strong salt sensitivity and achieve unusually fast kcat/Km approximately 10(9)-10(10) M(-1) s(-1), implying that RIP share with ribotoxins a common mechanism of electrostatically facilitated ribosome targeting. Bioinformatics analysis of RIP revealed that surface charge properties correlate with the presence of the transport chain in the RIP molecule, suggesting a second role for the surface charge in RIP transport. These findings put forward surface electrostatics as an important determinant of RIP activity.
α-肌动蛋白和蓖麻毒素代表了两个结构和作用机制不同的位点特异性酶家族,它们通过不可逆地修饰23S - 28S rRNA的肌动蛋白/蓖麻毒素环(SRL)来阻断翻译。α-肌动蛋白家族酶被称为核糖体毒素,起核酸内切酶的作用。蓖麻毒素家族酶被称为核糖体失活蛋白(RIP),起N-糖苷酶的作用。最近,我们证明了核糖体毒素restrictocin的碱性表面残基促进了这种核酸内切酶对核糖体的快速和特异性靶向。在此,我们报告三种RIP:蓖麻毒素A、皂草素和嗜石膏蛋白对核糖体进行脱嘌呤作用时具有很强的盐敏感性,并且实现了异常快速的催化常数/米氏常数,约为10⁹ - 10¹⁰ M⁻¹ s⁻¹,这意味着RIP与核糖体毒素具有静电促进核糖体靶向的共同机制。对RIP的生物信息学分析表明,表面电荷特性与RIP分子中转运链的存在相关,这表明表面电荷在RIP转运中具有第二个作用。这些发现提出表面静电是RIP活性的重要决定因素。