Shi Wei-Wei, Mak Amanda Nga-Sze, Wong Kam-Bo, Shaw Pang-Chui
Centre for Protein Science and Crystallography, School of Life Sciences, The Chinese University of Hong Kong, Shatin, N.T., Hong Kong, China.
Molecules. 2016 Nov 21;21(11):1588. doi: 10.3390/molecules21111588.
Ribosome-inactivating proteins (RIPs) including ricin, Shiga toxin, and trichosanthin, are RNA -glycosidases that depurinate a specific adenine residue (A-4324 in rat 28S ribosomal RNA, rRNA) in the conserved α-sarcin/ricin loop (α-SRL) of rRNA. RIPs are grouped into three types according to the number of subunits and the organization of the precursor sequences. RIPs are two-domain proteins, with the active site located in the cleft between the N- and C-terminal domains. It has been found that the basic surface residues of the RIPs promote rapid and specific targeting to the ribosome and a number of RIPs have been shown to interact with the C-terminal regions of the P proteins of the ribosome. At present, the structural basis for the interaction of trichosanthin and ricin-A chain toward P2 peptide is known. This review surveys the structural features of the representative RIPs and discusses how they approach and interact with the ribosome.
核糖体失活蛋白(RIPs),包括蓖麻毒素、志贺毒素和天花粉蛋白,是一类RNA糖苷酶,可使核糖体RNA(rRNA)保守的α-肌动蛋白/蓖麻毒素环(α-SRL)中的一个特定腺嘌呤残基(大鼠28S rRNA中的A-4324)脱嘌呤。根据亚基数量和前体序列的组织方式,RIPs可分为三种类型。RIPs是具有两个结构域的蛋白质,其活性位点位于N端和C端结构域之间的裂隙中。已发现RIPs的碱性表面残基促进其快速、特异性地靶向核糖体,并且已证明许多RIPs与核糖体P蛋白的C端区域相互作用。目前,已知天花粉蛋白和蓖麻毒素A链与P2肽相互作用的结构基础。本文综述了代表性RIPs的结构特征,并讨论了它们如何接近核糖体并与之相互作用。