de Rosa Matteo, Pennati Andrea, Pandini Vittorio, Monzani Enrico, Zanetti Giuliana, Aliverti Alessandro
Dipartimento di Scienze Biomolecolari e Biotecnologie, Università degli Studi di Milano, Italy.
FEBS J. 2007 Aug;274(15):3998-4007. doi: 10.1111/j.1742-4658.2007.05934.x. Epub 2007 Jul 16.
We have previously shown that Mycobacterium tuberculosis FprA, an NADPH-ferredoxin reductase homologous to mammalian adrenodoxin reductase, promotes the oxidation of NADP(+) to its 4-oxo derivative 3-carboxamide-4-pyridone adenine dinucleotide phosphate [Bossi RT, Aliverti A, Raimondi D, Fischer F, Zanetti G, Ferrari D, Tahallah N, Maier CS, Heck AJ, Rizzi M et al. (2002) Biochemistry41, 8807-8818]. Here, we provide a detailed study of this unusual enzyme reaction, showing that it occurs at a very slow rate (0.14 h(-1)), requires the participation of the enzyme-bound FAD, and is regiospecific in affecting only the C4 of the NADP nicotinamide ring. By protein engineering, we excluded the involvement in catalysis of residues Glu214 and His57, previously suggested to be implicated on the basis of their localization in the three-dimensional structure of the enzyme. Our results substantiate a catalytic mechanism for 3-carboxamide-4-pyridone adenine dinucleotide phosphate formation in which the initial and rate-determining step is the nucleophilic attack of the nicotinamide moiety by an active site water molecule. Whereas plant-type ferredoxin reductases were unable to oxidize NADP(+), the mammalian adrenodoxin reductase also catalyzed this unusual reaction. Thus, the 3-carboxamide-4-pyridone adenine dinucleotide phosphate formation reaction seems to be a peculiar feature of the mitochondrial type of ferredoxin reductases, possibly reflecting conserved properties of their active sites. Furthermore, we showed that 3-carboxamide-4-pyridone adenine dinucleotide phosphate is good ligand and a competitive inhibitor of various dehydrogenases, making this nucleotide analog a useful tool for the characterization of the cosubstrate-binding site of NADPH-dependent enzymes.
我们之前已经表明,结核分枝杆菌FprA是一种与哺乳动物肾上腺皮质铁氧化还原蛋白还原酶同源的NADPH - 铁氧化还原蛋白还原酶,它能促进NADP(+)氧化为其4 - 氧代衍生物3 - 羧酰胺 - 4 - 吡啶酮腺嘌呤二核苷酸磷酸[Bossi RT, Aliverti A, Raimondi D, Fischer F, Zanetti G, Ferrari D, Tahallah N, Maier CS, Heck AJ, Rizzi M等。(2002)生物化学41, 8807 - 8818]。在此,我们对这种不寻常的酶反应进行了详细研究,结果表明该反应速率非常缓慢(0.14 h(-1)),需要酶结合的FAD参与,并且具有区域特异性,仅影响NADP烟酰胺环的C4位。通过蛋白质工程,我们排除了之前基于其在酶三维结构中的定位而被认为与催化有关的Glu214和His57残基参与催化作用。我们的结果证实了3 - 羧酰胺 - 4 - 吡啶酮腺嘌呤二核苷酸磷酸形成的催化机制,其中初始且限速步骤是活性位点水分子对烟酰胺部分的亲核攻击。虽然植物型铁氧化还原蛋白还原酶无法氧化NADP(+),但哺乳动物肾上腺皮质铁氧化还原蛋白还原酶也能催化这种不寻常的反应。因此,3 - 羧酰胺 - 4 - 吡啶酮腺嘌呤二核苷酸磷酸形成反应似乎是线粒体型铁氧化还原蛋白还原酶的一个独特特征,可能反映了其活性位点的保守特性。此外,我们表明3 - 羧酰胺 - 4 - 吡啶酮腺嘌呤二核苷酸磷酸是多种脱氢酶的良好配体和竞争性抑制剂,使得这种核苷酸类似物成为表征NADPH依赖性酶的辅底物结合位点的有用工具。