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用单去丙酸血红素重构的肌红蛋白的结构和配体结合特性:每个血红素丙酸侧链的功能作用。

Structure and ligand binding properties of myoglobins reconstituted with monodepropionated heme: functional role of each heme propionate side chain.

作者信息

Harada Katsuyoshi, Makino Masatomo, Sugimoto Hiroshi, Hirota Shun, Matsuo Takashi, Shiro Yoshitsugu, Hisaeda Yoshio, Hayashi Takashi

机构信息

Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita 565-0871, Japan.

出版信息

Biochemistry. 2007 Aug 21;46(33):9406-16. doi: 10.1021/bi7007068. Epub 2007 Jul 18.

Abstract

Two heme propionate side chains, which are attached at the 6 and 7 positions of the heme framework, are linked with Arg45 and Ser92, respectively, in sperm whale myoglobin. To evaluate the role of each propionate, two kinds of one-legged hemins, 6-depropionated and 7-depropionated protohemins, were prepared and inserted into the apomyoglobin to yield two reconstituted proteins. Structural data of the reconstituted myoglobins were obtained via an X-ray crystallographic analysis at a resolution of 1.1-1.4 A and resonance Raman spectroscopy. It was found that the lack of the 6-propionate reduces the number of hydrogen bonds in the distal site and clearly changes the position of the Arg45 residue with the disrupting Arg45-Asp60 interaction. In contrast, the removal of the 7-propionate does not cause a significant structural change in the residues of the distal and proximal sites. However, the resonance Raman studies suggested that the coordination bond strength of the His93-Fe bond for the protein with the 7-depropionated protoheme slightly increases compared to that for the protein with the native heme. The O2 and CO ligand binding studies for the reconstituted proteins with the one-legged hemes provide an important insight into the functional role of each propionate. The lack of the 6-propionate accelerates the O2 dissociation by ca. 3-fold compared to those of the other reconstituted and native proteins. The lack of the 7-propionate enhances the CO affinity by 2-fold compared to that of the protein with the native heme. These results indicate that the 6-propionate clearly contributes to the stabilization of the bound O2, whereas the 7-propionate plays an important role in the regulation of the Fe-His bond.

摘要

在抹香鲸肌红蛋白中,连接在血红素骨架6位和7位的两条丙酸血红素侧链分别与精氨酸45和丝氨酸92相连。为了评估每条丙酸侧链的作用,制备了两种单脚血红素,即6-去丙酸原血红素和7-去丙酸原血红素,并将它们插入脱辅基肌红蛋白中,得到两种重组蛋白。通过分辨率为1.1 - 1.4埃的X射线晶体学分析和共振拉曼光谱获得了重组肌红蛋白的结构数据。结果发现,6-丙酸侧链的缺失减少了远侧位点的氢键数量,并明显改变了精氨酸45残基的位置,破坏了精氨酸45 - 天冬氨酸60的相互作用。相比之下,7-丙酸侧链的去除不会导致远侧和近侧位点残基发生显著的结构变化。然而,共振拉曼研究表明,与天然血红素蛋白相比,含有7-去丙酸原血红素的蛋白中,组氨酸93 - 铁键的配位键强度略有增加。对含有单脚血红素的重组蛋白进行的O₂和CO配体结合研究,为每条丙酸侧链的功能作用提供了重要的见解。与其他重组蛋白和天然蛋白相比,6-丙酸侧链的缺失使O₂解离速度加快约3倍。与含有天然血红素的蛋白相比,7-丙酸侧链的缺失使CO亲和力提高了2倍。这些结果表明,6-丙酸侧链明显有助于结合O₂的稳定,而7-丙酸侧链在调节铁-组氨酸键方面发挥着重要作用。

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