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水促进腺嘌呤的互变异构:微溶剂化的计算研究

Tautomerization of adenine facilitated by water: computational study of microsolvation.

作者信息

Kim Ho-Sung, Ahn Doo-Sik, Chung Sang-Yoon, Kim Sang Kyu, Lee Sungyul

机构信息

College of Environmental Science and Applied Chemistry (BK21), Kyunghee University, Kyungki-do 449-701, Korea.

出版信息

J Phys Chem A. 2007 Aug 16;111(32):8007-12. doi: 10.1021/jp074229d. Epub 2007 Jul 19.

Abstract

We present calculations for the mechanism and the barrier heights of tautomerization of adenine. We find various pathways for the 9(H) <--> 7(H) and 9(H) <--> 3(H) tautomerization. One mechanism for the 9(H) --> 7(H) tautomerization involves an sp(3)- or carbene-type intermediate, whereas the other proceeds via imine intermediates. Tautomerization from the 9(H) tautomer to 7(H) or 3(H) is predicted to occur with a very large activation barrier (60-70 kcal/mol), indicating that the processes may not occur readily in the gas phase. Interactions with the water molecule(s) are found to lower the barrier tremendously. We suggest that dramatic lowering of the 9(H) --> 3(H) and 9(H) --> 7(H) barriers by microsolvating water molecules may facilitate the formation and observation of the 7(H) and 3(H) tautomers in the solution phase.

摘要

我们给出了腺嘌呤互变异构的机理和势垒高度的计算结果。我们发现了9(H)⇌7(H)和9(H)⇌3(H)互变异构的多种途径。9(H)→7(H)互变异构的一种机理涉及sp(3)或卡宾型中间体,而另一种则通过亚胺中间体进行。预计从9(H)互变异构体到7(H)或3(H)的互变异构会有非常高的活化势垒(60 - 70千卡/摩尔),这表明这些过程在气相中可能不容易发生。发现与水分子的相互作用会极大地降低势垒。我们认为,微溶剂化水分子使9(H)→3(H)和9(H)→7(H)的势垒显著降低,这可能有助于在溶液相中形成和观察到7(H)和3(H)互变异构体。

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