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I类细胞因子受体的进化

Evolution of Class I cytokine receptors.

作者信息

Liongue Clifford, Ward Alister C

机构信息

School of Medicine, Deakin University, Geelong, Victoria, Australia.

出版信息

BMC Evol Biol. 2007 Jul 18;7:120. doi: 10.1186/1471-2148-7-120.

Abstract

BACKGROUND

The Class I cytokine receptors have a wide range of actions, including a major role in the development and function of immune and blood cells. However, the evolution of the genes encoding them remains poorly understood. To address this we have used bioinformatics to analyze the Class I receptor repertoire in sea squirt (Ciona intestinalis) and zebrafish (Danio rerio).

RESULTS

Only two Class I receptors were identified in sea squirt, one with homology to the archetypal GP130 receptor, and the other with high conservation with the divergent orphan receptor CLF-3. In contrast, 36 Class I cytokine receptors were present in zebrafish, including representative members for each of the five structural groups found in mammals. This allowed the identification of 27 core receptors belonging to the last common ancestor of teleosts and mammals.

CONCLUSION

This study suggests that the majority of diversification of this receptor family occurred after the divergence of urochordates and vertebrates approximately 794 million years ago (MYA), but before the divergence of ray-finned from lobe-finned fishes around 476 MYA. Since then, only relatively limited lineage-specific diversification within the different Class I receptor structural groups has occurred.

摘要

背景

I类细胞因子受体具有广泛的作用,包括在免疫细胞和血细胞的发育及功能中起主要作用。然而,编码它们的基因的进化仍知之甚少。为了解决这个问题,我们利用生物信息学分析了海鞘(玻璃海鞘)和斑马鱼(斑马鱼)中的I类受体库。

结果

在海鞘中仅鉴定出两种I类受体,一种与原型GP130受体具有同源性,另一种与分化的孤儿受体CLF-3具有高度保守性。相比之下,斑马鱼中存在36种I类细胞因子受体,包括在哺乳动物中发现的五个结构组中的每一组的代表性成员。这使得能够鉴定出属于硬骨鱼和哺乳动物的最后一个共同祖先的27种核心受体。

结论

这项研究表明,这个受体家族的大多数多样化发生在大约7.94亿年前(MYA)尾索动物和脊椎动物分化之后,但在大约4.76亿年前辐鳍鱼和肉鳍鱼分化之前。从那时起,不同I类受体结构组内仅发生了相对有限的谱系特异性多样化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/84da/1963337/41e7aa511b70/1471-2148-7-120-1.jpg

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