de Vega Miguel, Salas Margarita
Instituto de Biología Molecular Eladio Viñuela (CSIC), Centro de Biología Molecular Severo Ochoa (CSIC-UAM), Universidad Autónoma, Canto Blanco, 28049 Madrid, Spain.
Nucleic Acids Res. 2007;35(15):5096-107. doi: 10.1093/nar/gkm545. Epub 2007 Jul 25.
The harmfulness of 8-oxo-7,8-dihydro-2'-deoxyguanosine (8oxodG) damage resides on its dual coding potential, as it can pair with the correct dCMP (dC) or the incorrect dAMP (dA). Here, we investigate the translesional synthesis ability of family B 29 DNA polymerase on 8oxodG-containing templates. We show that this polymerase preferentially inserts dC opposite 8oxodG, its 3'-5' exonuclease activity acting indistinctly on both dA or dC primer terminus. In addition, 29 DNA polymerase shows a favoured extension of the 8oxodG/dA pair, but with an efficiency much lower than that of the canonical dG/dC pair. Additionally, we have analysed the role of the invariant tyrosine from motif B of family B DNA polymerases in translesional synthesis past 8oxodG, replacing the corresponding 29 DNA polymerase Tyr390 by Phe or Ser. The lack of the aromatic portion in mutant Y390S led to a lost of discrimination against dA insertion opposite 8oxodG. On the contrary, the absence of the hydroxyl group in the Y390F mutant precluded the favoured extension of 8oxodG:dA base pair with respect to 8oxodG:dC. Based on the results obtained, we propose that this Tyr residue contributes to dictate nucleotide insertion and extension preferences during translesion synthesis past 8oxodG by family B replicases.
8-氧代-7,8-二氢-2'-脱氧鸟苷(8-氧代-dG)损伤的有害性在于其双重编码潜力,因为它可以与正确的dCMP(dC)或错误的dAMP(dA)配对。在此,我们研究了B族29 DNA聚合酶在含8-氧代-dG模板上的跨损伤合成能力。我们发现,这种聚合酶优先在8-氧代-dG的对面插入dC,其3'-5'核酸外切酶活性对dA或dC引物末端的作用不明显。此外,29 DNA聚合酶显示出8-氧代-dG/dA对的延伸更有利,但效率远低于经典的dG/dC对。另外,我们分析了B族DNA聚合酶基序B中不变酪氨酸在跨越8-氧代-dG的跨损伤合成中的作用,将相应的29 DNA聚合酶Tyr390替换为Phe或Ser。突变体Y390S中芳香部分的缺失导致对8-氧代-dG对面插入dA的辨别能力丧失。相反,Y390F突变体中羟基的缺失排除了8-氧代-dG:dA碱基对比8-氧代-dG:dC更有利的延伸。基于所得结果,我们提出,该酪氨酸残基有助于决定B族复制酶在跨越8-氧代-dG的跨损伤合成过程中的核苷酸插入和延伸偏好。