• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
DNA polymerase from temperate phage Bam35 is endowed with processive polymerization and abasic sites translesion synthesis capacity.来自温和噬菌体Bam35的DNA聚合酶具有持续聚合和无碱基位点跨损伤合成能力。
Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):E3476-84. doi: 10.1073/pnas.1510280112. Epub 2015 Jun 22.
2
Evaluating the effects of enhanced processivity and metal ions on translesion DNA replication catalyzed by the bacteriophage T4 DNA polymerase.评估噬菌体T4 DNA聚合酶催化的跨损伤DNA复制过程中增强的持续合成能力和金属离子的作用。
J Mol Biol. 2003 May 16;328(5):1027-45. doi: 10.1016/s0022-2836(03)00370-x.
3
Accessory proteins assist exonuclease-deficient bacteriophage T4 DNA polymerase in replicating past an abasic site.辅助蛋白协助缺乏核酸外切酶的噬菌体T4 DNA聚合酶在无碱基位点处进行复制。
Biochem J. 2007 Mar 1;402(2):321-9. doi: 10.1042/BJ20060898.
4
Engineered viral DNA polymerase with enhanced DNA amplification capacity: a proof-of-concept of isothermal amplification of damaged DNA.具有增强 DNA 扩增能力的工程病毒 DNA 聚合酶:损伤 DNA 等温扩增的概念验证。
Sci Rep. 2020 Sep 14;10(1):15046. doi: 10.1038/s41598-020-71773-6.
5
Functional characterization of highly processive protein-primed DNA polymerases from phages Nf and GA-1, endowed with a potent strand displacement capacity.来自噬菌体Nf和GA-1的具有高效链置换能力的高度持续合成的蛋白质引发的DNA聚合酶的功能特性。
Nucleic Acids Res. 2006;34(20):6051-63. doi: 10.1093/nar/gkl769. Epub 2006 Oct 28.
6
Inactivation of the 3'-5' exonuclease of the replicative T4 DNA polymerase allows translesion DNA synthesis at an abasic site.复制性T4 DNA聚合酶的3'-5'核酸外切酶失活可使无碱基位点处进行跨损伤DNA合成。
J Mol Biol. 2004 Mar 5;336(5):1023-34. doi: 10.1016/j.jmb.2004.01.005.
7
DNA polymerase mutagenic bypass and proofreading of endogenous DNA lesions.DNA聚合酶对内源DNA损伤的诱变绕过和校对
Mutat Res. 1999 Mar 8;424(1-2):221-36. doi: 10.1016/s0027-5107(99)00021-4.
8
Translesion synthesis of abasic sites by yeast DNA polymerase epsilon.酵母DNA聚合酶ε对无碱基位点的跨损伤合成
J Biol Chem. 2009 Nov 13;284(46):31555-63. doi: 10.1074/jbc.M109.043927. Epub 2009 Sep 23.
9
DNA polymerase swapping in Caudoviricetes bacteriophages.Caudoviricetes 噬菌体中的 DNA 聚合酶交换。
Virol J. 2024 Aug 26;21(1):200. doi: 10.1186/s12985-024-02482-z.
10
In vitro replication of bacteriophage PRD1 DNA. Metal activation of protein-primed initiation and DNA elongation.噬菌体PRD1 DNA的体外复制。蛋白质引发起始和DNA延伸的金属激活。
Nucleic Acids Res. 1992 Aug 11;20(15):3971-6. doi: 10.1093/nar/20.15.3971.

引用本文的文献

1
Characterization and Engineering of Two Novel Strand-Displacing B Family DNA Polymerases from Phage SRT01hs and BeachBum.来自噬菌体SRT01hs和BeachBum的两种新型链置换B家族DNA聚合酶的表征与工程改造
Biomolecules. 2025 Aug 5;15(8):1126. doi: 10.3390/biom15081126.
2
Nucleic acid joining enzymes: biological functions and synthetic applications beyond DNA.核酸连接酶:DNA之外的生物学功能与合成应用
Biochem J. 2025 Jan 22;482(2):39-56. doi: 10.1042/BCJ20240136.
3
Identification of a novel family B DNA polymerase from Enterococcus phage IME199 and its overproduction in Escherichia coli BL21(DE3).从肠球菌噬菌体 IME199 中鉴定新型 B 族 DNA 聚合酶及其在大肠杆菌 BL21(DE3)中的过表达。
Microb Cell Fact. 2023 Oct 21;22(1):217. doi: 10.1186/s12934-023-02228-6.
4
DNA Polymerases for Whole Genome Amplification: Considerations and Future Directions.全基因组扩增用 DNA 聚合酶:考虑因素和未来方向。
Int J Mol Sci. 2023 May 26;24(11):9331. doi: 10.3390/ijms24119331.
5
Investigation of Linear Amplification Using Abasic Site-Containing Primers Coupled to Routine STR Typing for LT-DNA Analysis.使用含碱基缺失位点引物进行线性扩增结合常规 STR 分型用于 LT-DNA 分析的研究。
Genes (Basel). 2022 Aug 4;13(8):1386. doi: 10.3390/genes13081386.
6
Bacteriophage-Encoded DNA Polymerases-Beyond the Traditional View of Polymerase Activities.噬菌体编码的 DNA 聚合酶——超越传统聚合酶活性的观点。
Int J Mol Sci. 2022 Jan 7;23(2):635. doi: 10.3390/ijms23020635.
7
Unraveling Protein Interactions between the Temperate Virus Bam35 and Its Host Using an Integrative Yeast Two Hybrid-High Throughput Sequencing Approach.利用整合酵母双杂交-高通量测序方法解析温和噬菌体 Bam35 与其宿主之间的蛋白相互作用。
Int J Mol Sci. 2021 Oct 14;22(20):11105. doi: 10.3390/ijms222011105.
8
Unlimited Cooperativity of SSB, a Novel DNA Binding Protein Related to an Atypical Group of SSBs From Protein-Primed Replicating Bacterial Viruses.SSB的无限协同性,一种与蛋白质引发复制的细菌病毒中非典型SSB组相关的新型DNA结合蛋白。
Front Microbiol. 2021 Jun 29;12:699140. doi: 10.3389/fmicb.2021.699140. eCollection 2021.
9
Comparative Genomics of Prophages Sato and Sole Expands the Genetic Diversity Found in the Genus .前噬菌体佐藤和索尔的比较基因组学扩展了该属中发现的遗传多样性。
Microorganisms. 2021 Jun 19;9(6):1335. doi: 10.3390/microorganisms9061335.
10
Engineered viral DNA polymerase with enhanced DNA amplification capacity: a proof-of-concept of isothermal amplification of damaged DNA.具有增强 DNA 扩增能力的工程病毒 DNA 聚合酶:损伤 DNA 等温扩增的概念验证。
Sci Rep. 2020 Sep 14;10(1):15046. doi: 10.1038/s41598-020-71773-6.

本文引用的文献

1
Mechanism of suppression of chromosomal instability by DNA polymerase POLQ.DNA聚合酶POLQ抑制染色体不稳定性的机制。
PLoS Genet. 2014 Oct 2;10(10):e1004654. doi: 10.1371/journal.pgen.1004654. eCollection 2014 Oct.
2
Error Rate Comparison during Polymerase Chain Reaction by DNA Polymerase.DNA聚合酶在聚合酶链反应过程中的错误率比较
Mol Biol Int. 2014;2014:287430. doi: 10.1155/2014/287430. Epub 2014 Aug 17.
3
Phages preying on Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis: past, present and future.捕食炭疽芽孢杆菌、蜡样芽孢杆菌和苏云金芽孢杆菌的噬菌体:过去、现在与未来
Viruses. 2014 Jul 9;6(7):2623-72. doi: 10.3390/v6072623.
4
An overview of Y-Family DNA polymerases and a case study of human DNA polymerase η.Y 家族 DNA 聚合酶概述及人类 DNA 聚合酶 η 的案例研究。
Biochemistry. 2014 May 6;53(17):2793-803. doi: 10.1021/bi500019s. Epub 2014 Apr 23.
5
Random-primed, Phi29 DNA polymerase-based whole genome amplification.随机引物介导的基于Phi29 DNA聚合酶的全基因组扩增。
Curr Protoc Mol Biol. 2014 Jan 6;105:Unit 15.13.. doi: 10.1002/0471142727.mb1513s105.
6
Translesion DNA polymerases.跨损伤 DNA 聚合酶。
Cold Spring Harb Perspect Biol. 2013 Oct 1;5(10):a010363. doi: 10.1101/cshperspect.a010363.
7
Principles and concepts of DNA replication in bacteria, archaea, and eukarya.原核生物、古菌和真核生物中 DNA 复制的原理和概念。
Cold Spring Harb Perspect Biol. 2013 Jul 1;5(7):a010108. doi: 10.1101/cshperspect.a010108.
8
Replicative DNA polymerases.复制 DNA 聚合酶。
Cold Spring Harb Perspect Biol. 2013 Jun 1;5(6):a012799. doi: 10.1101/cshperspect.a012799.
9
Adenovirus DNA replication.腺病毒 DNA 复制。
Cold Spring Harb Perspect Biol. 2013 Mar 1;5(3):a013003. doi: 10.1101/cshperspect.a013003.
10
A transposon-derived DNA polymerase from Entamoeba histolytica displays intrinsic strand displacement, processivity and lesion bypass.从溶组织内阿米巴中分离的转座子衍生 DNA 聚合酶具有内在的链置换、持续合成和损伤绕过特性。
PLoS One. 2012;7(11):e49964. doi: 10.1371/journal.pone.0049964. Epub 2012 Nov 30.

来自温和噬菌体Bam35的DNA聚合酶具有持续聚合和无碱基位点跨损伤合成能力。

DNA polymerase from temperate phage Bam35 is endowed with processive polymerization and abasic sites translesion synthesis capacity.

作者信息

Berjón-Otero Mónica, Villar Laurentino, de Vega Miguel, Salas Margarita, Redrejo-Rodríguez Modesto

机构信息

Centro de Biología Molecular Severo Ochoa, Consejo Superior de Investigaciones Científicas and Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain.

Centro de Biología Molecular Severo Ochoa, Consejo Superior de Investigaciones Científicas and Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain

出版信息

Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):E3476-84. doi: 10.1073/pnas.1510280112. Epub 2015 Jun 22.

DOI:10.1073/pnas.1510280112
PMID:26100910
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4500267/
Abstract

DNA polymerases (DNAPs) responsible for genome replication are highly faithful enzymes that nonetheless cannot deal with damaged DNA. In contrast, translesion synthesis (TLS) DNAPs are suitable for replicating modified template bases, although resulting in very low-fidelity products. Here we report the biochemical characterization of the temperate bacteriophage Bam35 DNA polymerase (B35DNAP), which belongs to the protein-primed subgroup of family B DNAPs, along with phage Φ29 and other viral and mobile element polymerases. B35DNAP is a highly faithful DNAP that can couple strand displacement to processive DNA synthesis. These properties allow it to perform multiple displacement amplification of plasmid DNA with a very low error rate. Despite its fidelity and proofreading activity, B35DNAP was able to successfully perform abasic site TLS without template realignment and inserting preferably an A opposite the abasic site (A rule). Moreover, deletion of the TPR2 subdomain, required for processivity, impaired primer extension beyond the abasic site. Taken together, these findings suggest that B35DNAP may perform faithful and processive genome replication in vivo and, when required, TLS of abasic sites.

摘要

负责基因组复制的DNA聚合酶(DNAPs)是高度保真的酶,但仍无法处理受损的DNA。相比之下,跨损伤合成(TLS)DNAPs适合复制修饰的模板碱基,尽管会产生保真度非常低的产物。在这里,我们报告了温和噬菌体Bam35 DNA聚合酶(B35DNAP)的生化特性,它属于B族DNAPs的蛋白质引发亚组,与噬菌体Φ29以及其他病毒和移动元件聚合酶一起。B35DNAP是一种高度保真的DNAP,能够将链置换与连续DNA合成相结合。这些特性使其能够以非常低的错误率对质粒DNA进行多次置换扩增。尽管具有保真度和校对活性,B35DNAP仍能够成功地进行无模板重排的无碱基位点TLS,并优先在无碱基位点对面插入一个A(A规则)。此外,连续合成所需的TPR2亚结构域的缺失会损害引物在无碱基位点后的延伸。综上所述,这些发现表明B35DNAP可能在体内进行忠实且连续的基因组复制,并在需要时对无碱基位点进行TLS。