• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在不同序列背景下,人DNA聚合酶λ与增殖细胞核抗原及复制蛋白A对2-羟基腺嘌呤进行无差错旁路。

Error-free bypass of 2-hydroxyadenine by human DNA polymerase lambda with Proliferating Cell Nuclear Antigen and Replication Protein A in different sequence contexts.

作者信息

Crespan Emmanuele, Hübscher Ulrich, Maga Giovanni

机构信息

Institute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, I-27100 Pavia, Italy.

出版信息

Nucleic Acids Res. 2007;35(15):5173-81. doi: 10.1093/nar/gkm568. Epub 2007 Jul 30.

DOI:10.1093/nar/gkm568
PMID:17666409
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1976453/
Abstract

1,2-dihydro-2-oxoadenine (2-OH-A), a common DNA lesion produced by reactive oxygen species, is a strong replicative block for several DNA polymerases (DNA pols). We have previously shown that various bases can be misincorporated opposite the 2-OH-A lesion and the type of mispairs varies with either the sequence context or the type of DNA pol tested. Here, we have analysed the ability of the human pol family X member DNA pol lambda, to bypass the 2-OH-A lesion. DNA pol lambda can perform error-free bypass of 2-OH-A when this lesion is located in a random sequence, whereas in a repeated sequence context, even though bypass was also largely error-free, misincorporation of dGMP could be observed. The fidelity of translesion synthesis of 2-OH-A in a repeated sequence by DNA pol lambda was enhanced by the auxiliary proteins Proliferating Cell Nuclear Antigen (PCNA) and Replication Protein A (RP-A). We also found that the DNA pol lambda active site residue tyrosine 505 determined the nucleotide selectivity opposite 2-OH-A. Our data show, for the first time, that the 2-OH-A lesion can be efficiently and faithfully bypassed by a human DNA pol lambda in combination with PCNA and RP-A.

摘要

1,2 - 二氢 - 2 - 氧代腺嘌呤(2 - OH - A)是活性氧产生的常见DNA损伤,对多种DNA聚合酶(DNA pols)具有很强的复制阻断作用。我们之前已经表明,各种碱基可在2 - OH - A损伤的对面发生错配掺入,错配类型随序列背景或所测试的DNA pol类型而变化。在此,我们分析了人类聚合酶X家族成员DNA聚合酶λ绕过2 - OH - A损伤的能力。当2 - OH - A损伤位于随机序列中时,DNA聚合酶λ可以无错误地绕过它,而在重复序列背景下,尽管绕过过程在很大程度上也是无错误的,但可以观察到dGMP的错配掺入。增殖细胞核抗原(PCNA)和复制蛋白A(RP - A)这两种辅助蛋白增强了DNA聚合酶λ在重复序列中对2 - OH - A进行跨损伤合成的保真度。我们还发现,DNA聚合酶λ活性位点残基酪氨酸505决定了与2 - OH - A相对的核苷酸选择性。我们的数据首次表明,人类DNA聚合酶λ与PCNA和RP - A结合可以有效且忠实地绕过2 - OH - A损伤。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/0505a89ed870/gkm568f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/6154eef9f6e9/gkm568f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/09b74dcdc139/gkm568f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/14b9fc4db260/gkm568f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/0505a89ed870/gkm568f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/6154eef9f6e9/gkm568f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/09b74dcdc139/gkm568f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/14b9fc4db260/gkm568f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dee7/1976453/0505a89ed870/gkm568f4.jpg

相似文献

1
Error-free bypass of 2-hydroxyadenine by human DNA polymerase lambda with Proliferating Cell Nuclear Antigen and Replication Protein A in different sequence contexts.在不同序列背景下,人DNA聚合酶λ与增殖细胞核抗原及复制蛋白A对2-羟基腺嘌呤进行无差错旁路。
Nucleic Acids Res. 2007;35(15):5173-81. doi: 10.1093/nar/gkm568. Epub 2007 Jul 30.
2
Versatile enhancement of the killing potential of anti-cancer agents achieved by peptide mimetics of the PCNA interface towards specialized DNA polymerases.通过增殖细胞核抗原(PCNA)界面的肽模拟物对特定DNA聚合酶实现抗癌药物杀伤潜力的多功能增强。
Cell Death Dis. 2025 Jul 8;16(1):503. doi: 10.1038/s41419-025-07812-9.
3
A human high-fidelity DNA polymerase holoenzyme has a wide range of lesion bypass activities.一种人类高保真DNA聚合酶全酶具有广泛的损伤旁路活性。
Nucleic Acids Res. 2025 Jul 8;53(13). doi: 10.1093/nar/gkaf646.
4
Peptide Sequence and Cross-Link Structure Influence Translesion Synthesis Polymerase Bypass of 5-Formylcytosine-Mediated DNA-Peptide Cross-Links.肽序列和交联结构影响5-甲酰基胞嘧啶介导的DNA-肽交联的跨损伤合成聚合酶绕过。
Chem Res Toxicol. 2025 Jul 28. doi: 10.1021/acs.chemrestox.5c00215.
5
Oxidative DNA damage bypass in Arabidopsis thaliana requires DNA polymerase λ and proliferating cell nuclear antigen 2.拟南芥中氧化 DNA 损伤的旁路修复需要 DNA 聚合酶 λ 和增殖细胞核抗原 2。
Plant Cell. 2011 Feb;23(2):806-22. doi: 10.1105/tpc.110.081455. Epub 2011 Feb 15.
6
Nick sealing of polβ mismatch insertion products by LIG1 and LIG3α during 8-oxoG bypass leads to mutagenic or error-free base excision repair.在8-氧代鸟嘌呤(8-oxoG)绕过过程中,LIG1和LIG3α对polβ错配插入产物的尼克封闭导致诱变或无差错碱基切除修复。
J Biol Chem. 2025 Apr 24:108540. doi: 10.1016/j.jbc.2025.108540.
7
Catalytic and noncatalytic functions of DNA polymerase κ in translesion DNA synthesis.DNA聚合酶κ在跨损伤DNA合成中的催化和非催化功能。
Nat Struct Mol Biol. 2025 Feb;32(2):300-314. doi: 10.1038/s41594-024-01395-3. Epub 2024 Sep 19.
8
A switch between DNA polymerases δ and λ promotes error-free bypass of 8-oxo-G lesions.DNA 聚合酶 δ 和 λ 之间的转换可促进 8-氧鸟嘌呤碱基损伤的无差错绕过。
Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20401-6. doi: 10.1073/pnas.1211532109. Epub 2012 Nov 21.
9
8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins.人DNA聚合酶在辅助蛋白存在下对8-氧代鸟嘌呤的绕过。
Nature. 2007 May 31;447(7144):606-8. doi: 10.1038/nature05843. Epub 2007 May 16.
10
The proofreading mechanism of the human leading-strand DNA polymerase ε holoenzyme.人类前导链DNA聚合酶ε全酶的校对机制。
Proc Natl Acad Sci U S A. 2025 Jun 3;122(22):e2507232122. doi: 10.1073/pnas.2507232122. Epub 2025 May 29.

引用本文的文献

1
For the Better or for the Worse? The Effect of Manganese on the Activity of Eukaryotic DNA Polymerases.是好是坏?锰对真核 DNA 聚合酶活性的影响。
Int J Mol Sci. 2023 Dec 27;25(1):363. doi: 10.3390/ijms25010363.
2
Estimation of the Mutagenic Potential of 8-Oxog in Nuclear Extracts of Mouse Cells Using the "Framed Mirror" Method.使用“框架镜”法评估小鼠细胞核提取物中8-氧代鸟嘌呤的诱变潜力。
Methods Protoc. 2020 Jan 3;3(1):3. doi: 10.3390/mps3010003.
3
"Mirror" Method to Estimate Mutagenic Activity of DNA Lesions.估计DNA损伤诱变活性的“镜像”方法。

本文引用的文献

1
8-oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins.人DNA聚合酶在辅助蛋白存在下对8-氧代鸟嘌呤的绕过。
Nature. 2007 May 31;447(7144):606-8. doi: 10.1038/nature05843. Epub 2007 May 16.
2
Interplay between DNA polymerases beta and lambda in repair of oxidation DNA damage in chicken DT40 cells.鸡DT40细胞中DNA聚合酶β和λ在氧化DNA损伤修复中的相互作用。
DNA Repair (Amst). 2007 Jun 1;6(6):869-75. doi: 10.1016/j.dnarep.2007.01.011. Epub 2007 Mar 23.
3
Replication of 2-hydroxyadenine-containing DNA and recognition by human MutSalpha.
Methods Protoc. 2018 Aug 27;1(3):32. doi: 10.3390/mps1030032.
4
Noncatalytic, N-terminal Domains of DNA Polymerase Lambda Affect Its Cellular Localization and DNA Damage Response.DNA聚合酶λ的非催化性N端结构域影响其细胞定位和DNA损伤反应。
Chem Res Toxicol. 2017 May 15;30(5):1240-1249. doi: 10.1021/acs.chemrestox.7b00067. Epub 2017 Apr 13.
5
Understanding the Physical and Molecular Basis of Stability of Arabidopsis DNA Pol λ under UV-B and High NaCl Stress.了解拟南芥DNA聚合酶λ在UV-B和高盐胁迫下稳定性的物理和分子基础。
PLoS One. 2015 Jul 31;10(7):e0133843. doi: 10.1371/journal.pone.0133843. eCollection 2015.
6
The interplay of DNA polymerase λ in diverse DNA damage repair pathways in higher plant genome in response to environmental and genotoxic stress factors.高等植物基因组中DNA聚合酶λ在响应环境和基因毒性应激因素时在多种DNA损伤修复途径中的相互作用。
Plant Signal Behav. 2013 Jan;8(1):e22715. doi: 10.4161/psb.22715. Epub 2012 Dec 6.
7
Silencing of human DNA polymerase λ causes replication stress and is synthetically lethal with an impaired S phase checkpoint.沉默人 DNA 聚合酶 λ 会引起复制应激,并与 S 期检查点受损的细胞协同致死。
Nucleic Acids Res. 2013 Jan 7;41(1):229-41. doi: 10.1093/nar/gks1016. Epub 2012 Oct 30.
8
Bypass of a psoralen DNA interstrand cross-link by DNA polymerases β, ι, and κ in vitro.体外 DNA 聚合酶 β、ι 和 κ 对补骨脂素 DNA 链间交联的绕过。
Biochemistry. 2012 Nov 6;51(44):8931-8. doi: 10.1021/bi3008565. Epub 2012 Oct 29.
9
Human DNA polymerase β, but not λ, can bypass a 2-deoxyribonolactone lesion together with proliferating cell nuclear antigen.人类DNA聚合酶β而非λ能够与增殖细胞核抗原一起绕过2-脱氧核糖内酯损伤。
ACS Chem Biol. 2013 Feb 15;8(2):336-44. doi: 10.1021/cb300542k. Epub 2012 Nov 7.
10
Error-Prone Translesion DNA Synthesis by Escherichia coli DNA Polymerase IV (DinB) on Templates Containing 1,2-dihydro-2-oxoadenine.大肠杆菌DNA聚合酶IV(DinB)在含有1,2-二氢-2-氧代腺嘌呤的模板上进行易错跨损伤DNA合成。
J Nucleic Acids. 2010 Sep 26;2010:807579. doi: 10.4061/2010/807579.
含2-羟基腺嘌呤的DNA的复制及人MutSα的识别
DNA Repair (Amst). 2007 Mar 1;6(3):355-66. doi: 10.1016/j.dnarep.2006.11.002. Epub 2006 Dec 26.
4
Expanding the repertoire of DNA polymerase substrates: template-instructed incorporation of non-nucleoside triphosphate analogues by DNA polymerases beta and lambda.拓展DNA聚合酶底物的种类:DNA聚合酶β和λ通过模板指导掺入非核苷三磷酸类似物
Nucleic Acids Res. 2007;35(1):45-57. doi: 10.1093/nar/gkl1016. Epub 2006 Dec 5.
5
Nonoverlapping functions of DNA polymerases mu, lambda, and terminal deoxynucleotidyltransferase during immunoglobulin V(D)J recombination in vivo.DNA聚合酶μ、λ和末端脱氧核苷酸转移酶在体内免疫球蛋白V(D)J重组过程中的非重叠功能。
Immunity. 2006 Jul;25(1):31-41. doi: 10.1016/j.immuni.2006.04.013.
6
Functions of human replication protein A (RPA): from DNA replication to DNA damage and stress responses.人类复制蛋白A(RPA)的功能:从DNA复制到DNA损伤及应激反应
J Cell Physiol. 2006 Aug;208(2):267-73. doi: 10.1002/jcp.20622.
7
Human replication protein A can suppress the intrinsic in vitro mutator phenotype of human DNA polymerase lambda.人类复制蛋白A可抑制人类DNA聚合酶λ的内在体外诱变表型。
Nucleic Acids Res. 2006 Mar 6;34(5):1405-15. doi: 10.1093/nar/gkl032. Print 2006.
8
8-oxoguanine incorporation into DNA repeats in vitro and mismatch recognition by MutSalpha.8-氧代鸟嘌呤在体外掺入DNA重复序列以及MutSα对错配的识别。
Nucleic Acids Res. 2005 Sep 20;33(16):5094-105. doi: 10.1093/nar/gki813. Print 2005.
9
Incorporation of non-nucleoside triphosphate analogues opposite to an abasic site by human DNA polymerases beta and lambda.人DNA聚合酶β和λ将非核苷三磷酸类似物掺入无碱基位点对面。
Nucleic Acids Res. 2005 Jul 25;33(13):4117-27. doi: 10.1093/nar/gki723. Print 2005.
10
DNA polymerase lambda protects mouse fibroblasts against oxidative DNA damage and is recruited to sites of DNA damage/repair.DNA聚合酶λ保护小鼠成纤维细胞免受氧化性DNA损伤,并被招募至DNA损伤/修复位点。
J Biol Chem. 2005 Sep 9;280(36):31641-7. doi: 10.1074/jbc.C500256200. Epub 2005 Jul 7.