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估计DNA损伤诱变活性的“镜像”方法。

"Mirror" Method to Estimate Mutagenic Activity of DNA Lesions.

作者信息

Gening Leonid V, Shevchenko Oleg V, Kazachenko Konstantin Y, Tarantul Vyacheslav Z

机构信息

Institute of Molecular Genetics, Kurchatov Sq. 2, Moscow 123182, Russia.

出版信息

Methods Protoc. 2018 Aug 27;1(3):32. doi: 10.3390/mps1030032.

Abstract

We propose an improved method for detecting mutations that arise in DNA due to misincorporations of deoxyadenosine-5'-monophosphate (dAMP) opposite 7,8-dihydro-8-oxoguanine (8-oxoG). The method is based on the synthesis of complementary chains ("mirror" products) using a template containing 8-oxoG. The misincorporation of dAMP in the "mirror" product forms sites. The restriction analysis of double-stranded DNAs obtained by PCR of "mirror" product allows quantification of the mutagenesis frequency. In addition, single-strand conformational polymorphism (SSCP) analysis of the single-stranded "mirror" products shows that different DNA polymerases only incorporate dA or dC opposite 8-oxoG. The proposed approach used in developing this technique can be applied in the study of other lesions as well, both single and clustered.

摘要

我们提出了一种改进的方法,用于检测由于脱氧腺苷-5'-单磷酸(dAMP)与7,8-二氢-8-氧代鸟嘌呤(8-oxoG)错配而在DNA中产生的突变。该方法基于使用含有8-oxoG的模板合成互补链(“镜像”产物)。dAMP在“镜像”产物中的错配形成了位点。通过对“镜像”产物进行PCR获得的双链DNA的限制性分析允许对诱变频率进行定量。此外,对单链“镜像”产物的单链构象多态性(SSCP)分析表明,不同的DNA聚合酶在8-oxoG对面仅掺入dA或dC。开发该技术所采用的拟议方法也可应用于其他损伤的研究,包括单个损伤和聚集损伤。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d3f/6481070/168e0006ffa3/mps-01-00032-g001.jpg

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