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用于制备模板DNA及选择引物以通过聚合酶链式反应(PCR)鉴别米酒原料水稻品种的新方法。

Novel method for preparation of the template DNA and selection of primers to differentiate the material rice cultivars of rice wine by PCR.

作者信息

Ohtsubo Ken'ichi, Suzuki Keitaro, Haraguchi Kazutomo, Nakamura Sumiko

机构信息

National Food Research Institute, 2-1-12, Kan-nondai, Tsukuba Science City, Ibaraki, 305-8642 Japan.

出版信息

J Biochem Biophys Methods. 2008 Apr 24;70(6):1020-8. doi: 10.1016/j.jbbm.2007.07.001. Epub 2007 Jul 18.

Abstract

As many rice wine brewers label the name of the cultivar of the material rice, authentication technology is necessary. The problems are (1) decomposition of DNAs during the fermentation, (2) contamination of DNAs from microorganisms, (3) co-existence of PCR inhibitors, such as polyphenols. The present authors improved the PCR method by (1) lyophilizing and pulverizing the rice wine to concentrate DNAs, (2) decomposition of starches and proteins so as not to inhibit DNA extraction by the use of heat-resistant amylase and proteinase K, (3) purification of the template DNA by the combination of CTAB method and fractional precipitation by 70% EtOH. To prevent the amplification of microorganism's DNAs during PCR, the present authors selected the suitable plant-specific primers. It became possible to prepare the template DNAs for PCR from the rice wine. The sequences of the amplified DNAs by PCR were ascertained to be same with those of material rice. Mislabeling of material rice cultivar was detected by PCR using the commercial rice wine. It became possible to extract and purify the template DNAs for PCR from the rice wine and to differentiate the material rice cultivars by the PCR using the rice wine as a sample.

摘要

由于许多米酒酿造商都会标注原料大米的品种名称,因此需要鉴定技术。问题在于:(1)发酵过程中DNA的分解;(2)微生物DNA的污染;(3)多酚等PCR抑制剂的共存。作者通过以下方法改进了PCR方法:(1)将米酒冻干并粉碎以浓缩DNA;(2)利用耐热淀粉酶和蛋白酶K分解淀粉和蛋白质,以免抑制DNA提取;(3)通过CTAB法和70%乙醇分级沉淀相结合的方法纯化模板DNA。为防止PCR过程中微生物DNA的扩增,作者选择了合适的植物特异性引物。从米酒中制备用于PCR的模板DNA成为可能。通过PCR扩增得到的DNA序列经确定与原料大米的序列相同。使用市售米酒通过PCR检测到原料大米品种的错误标注。以米酒为样品,通过PCR从米酒中提取和纯化用于PCR的模板DNA并区分原料大米品种成为可能。

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