Laberge Monique, Yonetani Takashi
Department of Biochemistry and Biophysics, Johnson Research Foundation, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
IUBMB Life. 2007 Aug-Sep;59(8-9):528-34. doi: 10.1080/15216540701222914.
The recently discovered new members of the globin family, neurogobin and cytoglobin, are the object of sustained structural and functional studies aimed at understanding their physiological role and elucidating the impact of their bis-his heme hexacoordination. However, no studies have yet considered the dynamics of this protein family, an essential link between structure and function. In this communication, we present normal mode analysis results for neuroglobin, cytoglobin, hemoglobin and myoglobin to provide exploratory insights into globin characteristic motions. Our results show a clear correlation in the protein dynamics of this family. All four globins exhibit a high degree of correlated displacements involving residues in the C, E and F helices and link regions. They suggest that these motions play an important role in the reversible oxygen binding function of these proteins. Further, our results may help rationalize some functional features of the 6c-globins in that they alone exhibit correlated displacements of the G-helix region.
最近发现的珠蛋白家族新成员——神经珠蛋白和细胞珠蛋白,是持续进行的结构与功能研究的对象,这些研究旨在了解它们的生理作用,并阐明其二组氨酸血红素六配位的影响。然而,尚未有研究考虑过这个蛋白质家族的动力学,而动力学是结构与功能之间的重要联系。在本通讯中,我们展示了神经珠蛋白、细胞珠蛋白、血红蛋白和肌红蛋白的正常模式分析结果,以提供对珠蛋白特征运动的探索性见解。我们的结果显示了这个家族蛋白质动力学之间的明显相关性。所有这四种珠蛋白都表现出高度相关的位移,涉及C、E和F螺旋以及连接区域中的残基。这些结果表明,这些运动在这些蛋白质的可逆氧结合功能中起重要作用。此外,我们的结果可能有助于解释6c-珠蛋白的一些功能特征,因为只有它们表现出G螺旋区域的相关位移。