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蛋白质环境对光系统I中A1叶绿醌和Fx铁硫簇中点电位的贡献。

Contributions of the protein environment to the midpoint potentials of the A1 phylloquinones and the Fx iron-sulfur cluster in photosystem I.

作者信息

Karyagina Irina, Pushkar Yulia, Stehlik Dietmar, van der Est Art, Ishikita Hiroshi, Knapp Ernst-Walter, Jagannathan Bharat, Agalarov Rufat, Golbeck John H

机构信息

Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, D-14195, Berlin, Germany.

出版信息

Biochemistry. 2007 Sep 25;46(38):10804-16. doi: 10.1021/bi700846z. Epub 2007 Aug 29.

Abstract

Electrostatic calculations have predicted that the partial negative charge associated with D575PsaB plays a significant role in modulating the midpoint potentials of the A1A and A1B phylloquinones in photosystem I. To test this prediction, the side chain of residue 575PsaB was changed from negatively charged (D) to neutral (A) and to positively charged (K). D566PsaB, which is located at a considerable distance from either A1A or A1B, and should affect primarily the midpoint potential of FX, was similarly changed. In the 575PsaB variants, the rate of electron transfer from A1A to FX is observed to decrease slightly according to the sequence D/A/K. In the 566PsaB variants, the opposite effect of a slight increase in the rate is observed according to the same sequence D/A/K. These results are consistent with the expectation that changing these residues will shift the midpoint potentials of nearby cofactors to more positive values and that the magnitude of this shift will depend on the distance between the cofactors and the residues being changed. Thus, the midpoint potentials of A1A and A1B should experience a larger shift than will FX in the 575PsaB variants, while FX should experience a larger shift than will either A1A or A1B in the 566PsaB variants. As a result, the driving energy for electron transfer from A1A and A1B to FX will be decreased in the former and increased in the latter. This rationalization of the changes in kinetics is compared with the results of electrostatic calculations. While the altered amino acids shift the midpoint potentials of A1A, A1B, and FX by different amounts, the difference in the shifts between A1A and FX or between A1B and FX is small so that the overall effect on the electron transfer rate between A1A and FX or between A1B and FX is predicted to be small. These conclusions are borne out by experiment.

摘要

静电计算预测,与D575PsaB相关的部分负电荷在调节光系统I中A1A和A1B叶绿醌的中点电位方面起着重要作用。为了验证这一预测,将575PsaB残基的侧链从带负电荷的(D)改为中性的(A)和带正电荷的(K)。D566PsaB与A1A或A1B的距离相当远,主要应影响FX的中点电位,也进行了类似的改变。在575PsaB变体中,观察到从A1A到FX的电子转移速率按照D/A/K的顺序略有下降。在566PsaB变体中,观察到按照相同的D/A/K顺序速率略有增加的相反效果。这些结果与预期一致,即改变这些残基会使附近辅因子的中点电位向更正的值移动,并且这种移动的幅度将取决于辅因子与被改变残基之间的距离。因此,在575PsaB变体中,A1A和A1B的中点电位应比FX经历更大的移动,而在566PsaB变体中,FX应比A1A或A1B经历更大的移动。结果,在前一种情况下,从A1A和A1B到FX的电子转移驱动能量将降低,而在后一种情况下将增加。将这种动力学变化的合理化与静电计算结果进行了比较。虽然改变的氨基酸使A1A、A1B和FX的中点电位发生不同程度的移动,但A1A和FX之间或A1B和FX之间的移动差异很小,因此预计对A1A和FX之间或A1B和FX之间电子转移速率的总体影响很小。这些结论得到了实验的证实。

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