Department of Applied Chemistry, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8654, Japan.
Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8904, Japan.
Biochemistry. 2023 Feb 21;62(4):934-941. doi: 10.1021/acs.biochem.2c00689. Epub 2023 Feb 7.
Photosynthetic reaction centers from heliobacteria (HbRC) and green sulfur bacteria (GsbRC) are homodimeric proteins and share a common ancestor with photosystem I (PSI), classified as type I reaction centers. Using the HbRC crystal structure, we calculated the redox potential () values in the electron-transfer branches, solving the linear Poisson-Boltzmann equation and considering the protonation states of all titratable sites in the entire protein-pigment complex. (A) for bacteriochlorophyll at the secondary site in HbRC (-1157 mV) is as low as (A) for chlorophyll in PSI (-1173 mV). (A/HbRC) is at the same level as (A/GsbRC) and is 200 mV higher than (A/PSI) due to the replacement of PsaA-Trp697/PsaB-Trp677 in PSI with PshA-Arg554 in HbRC. In contrast, (F) for the FeS cluster in HbRC (-420 mV) is significantly higher than (F) in GsbRC (-719 mV) and PSI (-705 mV) due to the absence of acidic residues that correspond to PscA-Asp634 in GsbRC and PsaB-Asp575 in PSI. It seems likely that type I reaction centers have evolved, adopting (bacterio)chlorophylls suitable for their light environments while maintaining electron-transfer cascades.
类菌光合作用反应中心(HbRC)和绿硫细菌(GsbRC)的反应中心都是同二聚体蛋白,与光系统 I(PSI)有共同的祖先,被归类为 I 型反应中心。我们利用 HbRC 晶体结构,通过求解线性泊松-玻尔兹曼方程并考虑整个蛋白-色素复合物中所有可滴定位点的质子化状态,计算了电子传递分支中的氧化还原电位(E)值。(A)在 HbRC 二级位点的细菌叶绿素(-1157 mV)与 PSI 中的叶绿素(-1173 mV)一样低。(A/HbRC)与(A/GsbRC)处于同一水平,比(A/PSI)高 200 mV,这是由于 PSI 中的 PsaA-Trp697/PsaB-Trp677 被 HbRC 中的 PshA-Arg554 取代所致。相比之下,HbRC 中 FeS 簇的(F)值(-420 mV)明显高于 GsbRC(-719 mV)和 PSI(-705 mV)中的(F)值,这是因为 GsbRC 中的 PscA-Asp634 和 PSI 中的 PsaB-Asp575 对应的酸性残基缺失。I 型反应中心似乎是通过进化而来的,它们采用适合其光照环境的(细菌)叶绿素,同时保持电子传递级联。